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An Alternative Construction of Internodons: The Emergence of a Multi-level Tree of Life
- Source :
- Bulletin of Mathematical Biology. 77:23-45
- Publication Year :
- 2014
- Publisher :
- Springer Science and Business Media LLC, 2014.
-
Abstract
- Internodons are a formalization of Hennig's concept of species. We present an alternative construction of internodons imposing a tree structure on the genealogical network. We prove that the segments (trivial unary trees) from this tree structure are precisely the internodons. We obtain the following spin-offs. First, the generated tree turns out to be an organismal tree of life. Second, this organismal tree is homeomorphic to the phylogenetic Hennigian species tree of life, implying the discovery of a multi-level tree of life: this phylogenetic tree can be obtained by zooming out from the organismal tree, or conversely, the organismal tree of life can be generated by expanding the phylogenetic nodes into unary trees. Finally, the definition of the organismal tree allows an efficient algorithmic transformation of a given genealogical network into its corresponding phylogenetic species tree of life. The latter will be presented in a separate paper.
- Subjects :
- Male
Theoretical computer science
K-ary tree
Unary operation
Genetic Speciation
General Mathematics
Tree of life (biology)
Immunology
Biology
General Biochemistry, Genetics and Molecular Biology
Animals
Phylogeny
General Environmental Science
Pharmacology
Models, Genetic
Phylogenetic tree
General Neuroscience
Mathematical Concepts
Tree (data structure)
Tree structure
Transformation (function)
Computational Theory and Mathematics
Tree rearrangement
Female
General Agricultural and Biological Sciences
Algorithm
Algorithms
Subjects
Details
- ISSN :
- 15229602 and 00928240
- Volume :
- 77
- Database :
- OpenAIRE
- Journal :
- Bulletin of Mathematical Biology
- Accession number :
- edsair.doi.dedup.....b3a15cc39d73fb90ca6a77c6ee65e285
- Full Text :
- https://doi.org/10.1007/s11538-014-0048-2