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Entropy-regularized deconvolution of cellular cryotransmission electron tomograms
- Source :
- Proceedings of the National Academy of Sciences of the United States of America, Proceedings of the National Academy of Sciences of the United States of America, vol 118, iss 50
- Publication Year :
- 2021
- Publisher :
- National Academy of Sciences, 2021.
-
Abstract
- Significance Cellular cryo-electron tomography suffers from severely compromised Z resolution due to the missing wedges of information not collected during the acquisition of tilt series. This paper shows that application of entropy-regularized deconvolution to transmission electron tomography substantially fills in this missing information, allowing for improved Z resolution and better interpretation of cellular structures.<br />Cryo-electron tomography (cryo-ET) allows for the high-resolution visualization of biological macromolecules. However, the technique is limited by a low signal-to-noise ratio (SNR) and variance in contrast at different frequencies, as well as reduced Z resolution. Here, we applied entropy-regularized deconvolution (ER-DC) to cryo-ET data generated from transmission electron microscopy (TEM) and reconstructed using weighted back projection (WBP). We applied deconvolution to several in situ cryo-ET datasets and assessed the results by Fourier analysis and subtomogram analysis (STA).
- Subjects :
- Multidisciplinary
subtomogram analysis
1.1 Normal biological development and functioning
Entropy
Cryoelectron Microscopy
macromolecular substances
Saccharomyces cerevisiae
Biological Sciences
deconvolution
cryo-electron tomography
X-Ray Computed
Biophysics and Computational Biology
HEK293 Cells
Underpinning research
structural biology
Humans
Computer Simulation
missing wedge
Tomography, X-Ray Computed
Tomography
Subjects
Details
- Language :
- English
- ISSN :
- 10916490 and 00278424
- Volume :
- 118
- Issue :
- 50
- Database :
- OpenAIRE
- Journal :
- Proceedings of the National Academy of Sciences of the United States of America
- Accession number :
- edsair.doi.dedup.....b35bc87268a7a480f36068e6410ec175