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Entropy-regularized deconvolution of cellular cryotransmission electron tomograms

Authors :
Matthew Croxford
Michael Elbaum
Muthuvel Arigovindan
Zvi Kam
David Agard
Elizabeth Villa
John Sedat
Source :
Proceedings of the National Academy of Sciences of the United States of America, Proceedings of the National Academy of Sciences of the United States of America, vol 118, iss 50
Publication Year :
2021
Publisher :
National Academy of Sciences, 2021.

Abstract

Significance Cellular cryo-electron tomography suffers from severely compromised Z resolution due to the missing wedges of information not collected during the acquisition of tilt series. This paper shows that application of entropy-regularized deconvolution to transmission electron tomography substantially fills in this missing information, allowing for improved Z resolution and better interpretation of cellular structures.<br />Cryo-electron tomography (cryo-ET) allows for the high-resolution visualization of biological macromolecules. However, the technique is limited by a low signal-to-noise ratio (SNR) and variance in contrast at different frequencies, as well as reduced Z resolution. Here, we applied entropy-regularized deconvolution (ER-DC) to cryo-ET data generated from transmission electron microscopy (TEM) and reconstructed using weighted back projection (WBP). We applied deconvolution to several in situ cryo-ET datasets and assessed the results by Fourier analysis and subtomogram analysis (STA).

Details

Language :
English
ISSN :
10916490 and 00278424
Volume :
118
Issue :
50
Database :
OpenAIRE
Journal :
Proceedings of the National Academy of Sciences of the United States of America
Accession number :
edsair.doi.dedup.....b35bc87268a7a480f36068e6410ec175