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Proton Migration and Tautomerism in Protonated Triglycine
- Source :
- Journal of the American Chemical Society. 123:3006-3012
- Publication Year :
- 2001
- Publisher :
- American Chemical Society (ACS), 2001.
-
Abstract
- Proton migration in protonated glycylglycylglycine (GGG) has been investigated by using density functional theory at the B3LYP/6-31++G(d,p) level of theory. On the protonated GGG energy hypersurface 19 critical points have been characterized, 11 as minima and 8 as first-order saddle points. Transition state structures for interconversion between eight of these minima are reported, starting from a structure in which there is protonation at the amino nitrogen of the N-terminal glycyl residue following the migration of the proton until there is fragmentation into protonated 2-aminomethyl-5-oxazolone (the b(2) ion) and glycine. Individual free energy barriers are small, ranging from 4.3 to 18.1 kcal mol(-)(1). The most favorable site of protonation on GGG is the carbonyl oxygen of the N-terminal residue. This isomer is stabilized by a hydrogen bond of the type O-H.N with the N-terminal nitrogen atom, resulting in a compact five-membered ring. Another oxygen-protonated isomer with hydrogen bonding of the type O-H.O, resulting in a seven-membered ring, is only 0.1 kcal mol(-)(1) higher in free energy. Protonation on the N-terminal nitrogen atom produces an isomer that is about 1 kcal mol(-)(1) higher in free energy than isomers resulting from protonation on the carbonyl oxygen of the N-terminal residue. The calculated energy barrier to generate the b(2) ion from protonated GGG is 32.5 kcal mol(-)(1) via TS(6--7). The calculated basicity and proton affinity of GGG from our results are 216.3 and 223.8 kcal mol(-)(1), respectively. These values are 3-4 kcal mol(-)(1) lower than those from previous calculations and are in excellent agreement with recently revised experimental values.
- Subjects :
- Hydrogen bond
Chemistry
Stereochemistry
chemistry.chemical_element
Protonation
General Chemistry
Biochemistry
Tautomer
Oxygen
Catalysis
Ion
Crystallography
Colloid and Surface Chemistry
Energy Transfer
Isomerism
Fragmentation (mass spectrometry)
Quantum Theory
Proton affinity
Density functional theory
Protons
Oligopeptides
Protein Binding
Subjects
Details
- ISSN :
- 15205126 and 00027863
- Volume :
- 123
- Database :
- OpenAIRE
- Journal :
- Journal of the American Chemical Society
- Accession number :
- edsair.doi.dedup.....b2137b9ee3cfbb00d95c259ca0d25af4
- Full Text :
- https://doi.org/10.1021/ja0015904