Back to Search Start Over

Draft genome sequence of Sclerospora graminicola, the pearl millet downy mildew pathogen

Authors :
S. Chandra Nayaka
Om Vir Singh
Pankaj Kaushal
Rakesh K. Srivastava
Swati Puranik
T.A. Anoop
H. Shekar Shetty
M. Nagaraju
C. Tara Satyavathi
P. B. Kavi Kishor
A.V.S.K. Mohan Katta
V. B. Reddy Lachagari
Rattan Yadav
Boney Kuriakose
Pranav Pankaj Sahu
M. Milner Kumar
Navajeet Chakravartty
Source :
Biotechnology Reports, Vol 16, Iss, Pp 18-20 (2017)
Publication Year :
2017
Publisher :
Elsevier, 2017.

Abstract

Sclerospora graminicola pathogen is the most important biotic production constraints of pearl millet in India, Africa and other parts of the world. We report a de novo whole genome assembly and analysis of pathotype 1, one of the most virulent pathotypes of S. graminicola from India. The draft genome assembly contained 299,901,251 bp with 65,404 genes. This study may help understand the evolutionary pattern of pathogen and aid elucidation of effector evolution for devising effective durable resistance breeding strategies in pearl millet. Keywords: Sclerospora graminicola, Pathotype 1, Pearl millet, Downy mildew, Whole genome sequence

Details

Language :
English
Volume :
16
Database :
OpenAIRE
Journal :
Biotechnology Reports
Accession number :
edsair.doi.dedup.....b16aa6d17c071c4057da9ba0493455c2