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Realistic Vendor-Specific Synthetic Ultrasound Data for Quality Assurance of 2-D Speckle Tracking Echocardiography: Simulation Pipeline and Open Access Database

Authors :
Mathieu De Craene
Olivier Bernard
Martino Alessandrini
Brecht Heyde
Maxime Sermesant
Jan D'hooge
Bidisha Chakraborty
Imagerie Ultrasonore
Centre de Recherche en Acquisition et Traitement de l'Image pour la Santé (CREATIS)
Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon)
Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Hospices Civils de Lyon (HCL)-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven)
Laboratory of Cardiovascular Imaging and Dynamics
Images et Modèles
MedisysResearch Lab (Medisys)
Philips Research
Analysis and Simulation of Biomedical Images (ASCLEPIOS)
Inria Sophia Antipolis - Méditerranée (CRISAM)
Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)
Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Université Jean Monnet - Saint-Étienne (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
Source :
IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control, Institute of Electrical and Electronics Engineers, 2018, 65 (3), pp.411-422. ⟨10.1109/TUFFC.2017.2786300⟩, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control, 2018, 65 (3), pp.411-422. ⟨10.1109/TUFFC.2017.2786300⟩
Publication Year :
2018
Publisher :
HAL CCSD, 2018.

Abstract

Two-dimensional (2-D) echocardiography is the modality of choice in the clinic for the diagnosis of cardiac disease. Hereto, speckle tracking (ST) packages complement visual assessment by the cardiologist by providing quantitative diagnostic markers of global and regional cardiac function (e.g., displacement, strain, and strain-rate). Yet, the reported high vendor-dependence between the outputs of different ST packages raises clinical concern and hampers the widespread dissemination of the ST technology. In part, this is due to the lack of a solid commonly accepted quality assurance pipeline for ST packages. Recently, we have developed a framework to benchmark ST algorithms for 3-D echocardiography by using realistic simulated volumetric echocardiographic recordings. Yet, 3-D echocardiography remains an emerging technology, whereas the compelling clinical concern is, so far, directed to the standardization of 2-D ST only. Therefore, by building upon our previous work, we present in this paper a pipeline to generate realistic synthetic sequences for 2-D ST algorithms. Hereto, the synthetic cardiac motion is obtained from a complex electromechanical heart model, whereas realistic vendor-specific texture is obtained by sampling a real clinical ultrasound recording. By modifying the parameters in our pipeline, we generated an open-access library of 105 synthetic sequences encompassing: 1) healthy and ischemic motion patterns; 2) the most common apical probe orientations; and 3) vendor-specific image quality from seven different systems. Ground truth deformation is also provided to allow performance analysis. The application of the provided data set is also demonstrated in the benchmarking of a recent academic ST algorithm.

Details

Language :
English
ISSN :
08853010
Database :
OpenAIRE
Journal :
IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control, Institute of Electrical and Electronics Engineers, 2018, 65 (3), pp.411-422. ⟨10.1109/TUFFC.2017.2786300⟩, IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control, 2018, 65 (3), pp.411-422. ⟨10.1109/TUFFC.2017.2786300⟩
Accession number :
edsair.doi.dedup.....b064b75436e2d4bf6dbd5a261ef34250