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Systematic analyses of a novel lncRNA‐associated signature as the prognostic biomarker for Hepatocellular Carcinoma
- Source :
- Cancer Medicine, Cancer Medicine, Vol 7, Iss 7, Pp 3240-3256 (2018)
- Publication Year :
- 2018
- Publisher :
- John Wiley and Sons Inc., 2018.
-
Abstract
- Accumulating evidence implies that long noncoding RNAs (lncRNAs) play a crucial role in predicting survival for Hepatocellular carcinoma (HCC) patients. This study aims to capture the current research hotspots of HCC, based on the analysis of publications related to HCC research from 2013 to 2017, and to identify a novel lncRNA signature for HCC prognosis through the data mining in The Cancer Genome Atlas (TCGA). “Prognosis” and “biomarker” were located in the core of the HCC research hotspot. Moreover, long noncoding RNA was the top one research frontier in HCC research. The associations between survival outcome and the expression of lncRNAs were evaluated by the univariate and multivariate Cox proportional hazards regression analyses. Four lncRNAs (LINC00261, TRELM3P, GBP1P1, and CDKN2B‐AS1) were identified as significantly correlated with overall survival (OS). These four lncRNAs were gathered as a single prognostic signature. There was a significant positive correlation between HCC patients with low‐risk scores and overall survival (HR = 1.802, 95%CI [1.224‐2.652], P = .003). Further analysis suggested that the prognostic value of this four‐lncRNA signature was independent in clinical features. The enrichment analysis of prognostic lncRNA‐related gene was performed to find out the related pathways. Our study indicates that this novel lncRNA expression signature may be a useful biomarker of the prognosis for HCC patients, based on bioinformatics analysis.
- Subjects :
- 0301 basic medicine
Oncology
Cancer Research
medicine.medical_specialty
Bioinformatics analysis
Hepatocellular carcinoma
overall survival
The Cancer Genome Atlas
03 medical and health sciences
0302 clinical medicine
Internal medicine
Cox proportional hazards regression
Overall survival
medicine
Radiology, Nuclear Medicine and imaging
Prognostic biomarker
long noncoding RNA
prognostic biomarker
Gene
RC254-282
Original Research
Cancer Biology
business.industry
Neoplasms. Tumors. Oncology. Including cancer and carcinogens
Lncrna expression
medicine.disease
Long non-coding RNA
digestive system diseases
030104 developmental biology
030220 oncology & carcinogenesis
business
Subjects
Details
- Language :
- English
- ISSN :
- 20457634
- Volume :
- 7
- Issue :
- 7
- Database :
- OpenAIRE
- Journal :
- Cancer Medicine
- Accession number :
- edsair.doi.dedup.....af09ff02700ed0ab5292aacc94ff696f