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Streptomyces bathyalis sp. nov., an actinobacterium isolated from the sponge in a deep sea
- Source :
- Antonie Van Leeuwenhoek, Antonie van Leeuwenhoek, Netherlands
- Publication Year :
- 2021
- Publisher :
- Springer Science and Business Media LLC, 2021.
-
Abstract
- A novel actinobacterium, designated ASO4wetT, was isolated from the unidentified sponge (SO4) in the deep sea collected of the North Atlantic Ocean. Study of 16S rRNA gene sequences indicated that strain ASO4wetT is a member of the genus Streptomyces and showed the closest similarities to Streptomyces karpasiensis K413T (98.87 %), Streptomyces glycovorans YIM M 10366T (98.38 %), and Streptomyces abyssalis YIM M 10400T (97.53 %). Strain ASO4wetT contained MK-9(H8) as the predominant menaquinone and the major fatty acids are iso-C16:0, anteiso-C15:0, and iso-C15:0. Polyphasic taxonomy was carried out between strain ASO4wetT and its phylogenetically closely related Streptomyces strains, which further elucidated their relatedness and revealed that strain ASO4wetT could be distinguished from currently known Streptomyces species. Strain ASO4wetT clearly represents a novel species in genus Streptomyces. We propose the name Streptomyces bathyalis sp. nov., with the type strain ASO4wetT (= DSM 106605T = NCCB 100657T). Analysis of the whole-genome sequence of S. bathyalis revealed that genome size is 7,377,472 bp with 6332 coding sequences.
- Subjects :
- DNA, Bacterial
Streptomyces abyssalis
The North Atlantic Ocean
Biology
Diaminopimelic Acid
Microbiology
Streptomyces
RNA, Ribosomal, 16S
TheoryofComputation_ANALYSISOFALGORITHMSANDPROBLEMCOMPLEXITY
Botany
Streptomyces glycovorans
Molecular Biology
Genome size
Deep‐sea sponge
Phylogeny
Streptomyces karpasiensis
Original Paper
Strain (chemistry)
Fatty Acids
Nucleic Acid Hybridization
Vitamin K 2
Sequence Analysis, DNA
General Medicine
16S ribosomal RNA
biology.organism_classification
Bacterial Typing Techniques
Taxonomy (biology)
Polyphasic taxonomy
Subjects
Details
- ISSN :
- 15729699 and 00036072
- Volume :
- 114
- Database :
- OpenAIRE
- Journal :
- Antonie van Leeuwenhoek
- Accession number :
- edsair.doi.dedup.....ae0054c59415a4bfc011cdc169449a69
- Full Text :
- https://doi.org/10.1007/s10482-021-01528-4