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Streptomyces bathyalis sp. nov., an actinobacterium isolated from the sponge in a deep sea

Authors :
Peter J. Schupp
Manfred Rohde
Chandra Risdian
Cathrin Spröer
Peter Schumann
Peter Kämpfer
Richard L. Hahnke
Boyke Bunk
Wiebke Landwehr
Joachim Wink
HZI,Helmholtz-Zentrum für Infektionsforschung GmbH, Inhoffenstr. 7,38124 Braunschweig, Germany.
Source :
Antonie Van Leeuwenhoek, Antonie van Leeuwenhoek, Netherlands
Publication Year :
2021
Publisher :
Springer Science and Business Media LLC, 2021.

Abstract

A novel actinobacterium, designated ASO4wetT, was isolated from the unidentified sponge (SO4) in the deep sea collected of the North Atlantic Ocean. Study of 16S rRNA gene sequences indicated that strain ASO4wetT is a member of the genus Streptomyces and showed the closest similarities to Streptomyces karpasiensis K413T (98.87 %), Streptomyces glycovorans YIM M 10366T (98.38 %), and Streptomyces abyssalis YIM M 10400T (97.53 %). Strain ASO4wetT contained MK-9(H8) as the predominant menaquinone and the major fatty acids are iso-C16:0, anteiso-C15:0, and iso-C15:0. Polyphasic taxonomy was carried out between strain ASO4wetT and its phylogenetically closely related Streptomyces strains, which further elucidated their relatedness and revealed that strain ASO4wetT could be distinguished from currently known Streptomyces species. Strain ASO4wetT clearly represents a novel species in genus Streptomyces. We propose the name Streptomyces bathyalis sp. nov., with the type strain ASO4wetT (= DSM 106605T = NCCB 100657T). Analysis of the whole-genome sequence of S. bathyalis revealed that genome size is 7,377,472 bp with 6332 coding sequences.

Details

ISSN :
15729699 and 00036072
Volume :
114
Database :
OpenAIRE
Journal :
Antonie van Leeuwenhoek
Accession number :
edsair.doi.dedup.....ae0054c59415a4bfc011cdc169449a69
Full Text :
https://doi.org/10.1007/s10482-021-01528-4