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Additional file 5: of A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

Authors :
Berthenet, Elvire
Yahara, Koji
Thorell, Kaisa
Pascoe, Ben
Meric, Guillaume
Mikhail, Jane
Engstrand, Lars
Enroth, Helena
Burette, Alain
Megraud, Francis
Varon, Christine
Atherton, John
Sinead Smith
Wilkinson, Thomas
Hitchings, Matthew
Falush, Daniel
Sheppard, Samuel
Publication Year :
2018
Publisher :
figshare, 2018.

Abstract

Table S1. Isolate details for the global 565 strains dataset. Summary of geographic provenance, fineSTRUCTURE population and source for the global dataset of 565 strains. Table S2. Isolate details for the hpEurope GWAS dataset. Summary of metadata for the 173 strains used in the GWAS study. Host pathology, GWAS group, isolation country, isolation city or region and H. pylori population are given when available. Table S3. List of the 32 genes highlighted in at least one of the GWAS experiments. The minimum p value and an annotation (obtained by Prokka) is mentioned for each gene. (DOCX 89 kb)

Details

Database :
OpenAIRE
Accession number :
edsair.doi.dedup.....ad4d7e19b3ced8d30e5e8e7e73faee88
Full Text :
https://doi.org/10.6084/m9.figshare.6916418