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Dynamic pruned-enriched Rosenbluth method
- Source :
- Molecular Physics, 101(11), 1675-1682. Taylor and Francis Ltd., Molecular physics, 101(11), 1675. Taylor & Francis group, Molecular Physics, 101, 1675. Taylor and Francis Ltd.
- Publication Year :
- 2003
-
Abstract
- Recently, Grassberger [1997, Phys. Rev. E, 56, 3682] has presented a new algorithm ('PERM') for simulating flexible polymer chains. This algorithm has been shown to have a good efficiency and has been used in a wide class of systems. A drawback of this algorithm is that it is static: it is therefore not suited for Markov-chain Monte Carlo simulations. Here, we present a dynamic generalization of the PERM algorithm. For a specific example, we compare the efficiency of DPERM to that of other Monte Carlo algorithms. In the case studied, we find that DPERM is only marginally more efficient. However, this result may depend on the details of the implementation.
- Subjects :
- Computer science
Monte Carlo method
Biophysics
Scheikunde
Condensed Matter Physics
Hybrid Monte Carlo
Dynamic Monte Carlo method
Monte Carlo integration
Monte Carlo method in statistical physics
Kinetic Monte Carlo
Quasi-Monte Carlo method
Physical and Theoretical Chemistry
Molecular Biology
Algorithm
Monte Carlo molecular modeling
Subjects
Details
- Language :
- English
- ISSN :
- 00268976
- Database :
- OpenAIRE
- Journal :
- Molecular Physics, 101(11), 1675-1682. Taylor and Francis Ltd., Molecular physics, 101(11), 1675. Taylor & Francis group, Molecular Physics, 101, 1675. Taylor and Francis Ltd.
- Accession number :
- edsair.doi.dedup.....ac219739ffb98d92f04a71cecc9cdace