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Paenibacillus darwinianus sp. nov., isolated from gamma-irradiated Antarctic soil
- Source :
- International journal of systematic and evolutionary microbiology. 64(Pt 4)
- Publication Year :
- 2014
-
Abstract
- A novel bacterium, strain BrT, was isolated from gamma-irradiated soils of the Britannia drift, Lake Wellman Region, Antarctica. This isolate was rod-shaped, endospore forming, Gram-stain-variable, catalase-positive, oxidase-negative and strictly aerobic. Cells possessed a monotrichous flagellum. Optimal growth was observed at 18 °C, pH 7.0 in PYGV or R2A broth. The major cellular fatty acid was anteiso-C15 : 0 (63.4 %). Primary identified lipids included phosphatidylethanolamine, diphosphatidylglycerol and phosphatidylglycerol. Total phospholipid was 60 % (w/w) of the total lipid extract. MK-7 was the dominant isoprenoid quinone. The genomic DNA G+C content was 55.6 mol%. Based on 16S rRNA gene sequence similarity, strain BrT clusters within the genus Paenibacillus with similarity values ranging from 93.9 to 95.1 %. Phylogenetic analyses by maximum-likelihood, maximum-parsimony and neighbour-joining methods revealed that strain BrT clusters with Paenibacillus daejeonensis (AF290916), Paenibacillus tarimensis (EF125184) and Paenibacillus pinihumi (GQ423057), albeit with weak bootstrap support. On the basis of phenotypic, chemotaxonomic and phylogenetic characteristics, we propose that strain BrT represents a novel species, Paenibacillus darwinianus sp. nov. The type strain is BrT ( = DSM 27245T = ICMP 19912T).
- Subjects :
- Sequence analysis
Molecular Sequence Data
Antarctic Regions
Biology
Microbiology
Endospore
Phylogenetics
RNA, Ribosomal, 16S
Botany
Ecology, Evolution, Behavior and Systematics
Phospholipids
Phylogeny
Soil Microbiology
Base Composition
Strain (chemistry)
Fatty Acids
Vitamin K 2
General Medicine
Sequence Analysis, DNA
Ribosomal RNA
16S ribosomal RNA
biology.organism_classification
Bacterial Typing Techniques
Soil microbiology
Paenibacillus
Bacteria
Subjects
Details
- ISSN :
- 14665034
- Volume :
- 64
- Issue :
- Pt 4
- Database :
- OpenAIRE
- Journal :
- International journal of systematic and evolutionary microbiology
- Accession number :
- edsair.doi.dedup.....aacf70046677fb01b1337cea5e2c636a