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Cascaded Multi-view Canonical Correlation (CaMCCo) for Early Diagnosis of Alzheimer’s Disease via Fusion of Clinical, Imaging and Omic Features

Authors :
Sterling C. Johnson
Paul Malloy
Joy L. Taylor
Alan J. Lerner
Pradeep Garg
Pierre N. Tariot
David G. Clark
Steven G. Potkin
Franklin Watkins
Howard Bergman
Dana M. Pogorelec
Charles D. Smith
Pradeep Varma
Stephen Pasternack
Betty Lind
Saba Wolday
Douglas W. Scharre
Donna Munic
Marwan N. Sabbagh
Adam S. Fleisher
Joanne S. Allard
Cynthia Hunt
Lidia Glodzik
Charles Bernick
Daniel D'Agostino
Owen T. Carmichael
Geoffrey Tremont
Christopher H. van Dyck
Maria Carroll
Po Lu
Leslie Gordineer
Catherine Mc-Adams-Ortiz
Irina Rachisky
Antero Sarrael
Clifford R. Jack
David Bachman
Dick Trost
Scott Herring
Arthur W. Toga
Evan Fletcher
Christina A. Michel
Lon S. Schneider
Francine Parfitt
Kelly M. Makino
Anahita Adeli
Daniel Varon
Christine M. Belden
Nunzio Pomara
Thomas O. Obisesan
Howard Feldman
Howard Chertkow
Sandra W. Jacobson
Haibo Wang
Greg Jicha
Laura A. Flashman
George Bartzokis
Beau M. Ances
Stacy Schneider
Earl A. Zimmerman
Munir Chowdhury
Bruce L. Miller
Javier Villanueva-Meyer
Kristin Fargher
Michael W. Weiner
Dana Nguyen
Ranjan Duara
T. Y. Lee
Lisa C. Silbert
Benita Mudge
Marilyn S. Albert
James J. Lah
Janet S. Cellar
Gad A. Marshall
Michael Lin
Marc Seltzer
Leslie Shaw
Bojana Stefanovic
Daniel C. Marson
Kyle B. Womack
Liberty Teodoro
Connie Brand
Nadira Trncic
Maria Kataki
Russell H. Swerdlow
Paul S. Aisen
Brigid Reynolds
Mony J. de Leon
Sandra E. Black
Rachelle S. Doody
Paula Ogrocki
Andrew J. Saykin
Raymundo Hernando
Leyla deToledo-Morrell
Anna Burke
Sherye A. Sirrel
Henry W. Querfurth
Jeffrey R. Petrella
Norman R. Relkin
Judith L. Heidebrink
Vernice Bates
Mary L. Creech
David C. Perry
Curtis Caldwell
Sara Dolen
Anton P. Porsteinsson
Patricia Lynn Johnson
Erik D. Roberson
Effie M. Mitsis
Kathleen Johnson
John Q. Trojanowki
Raina Carter
James E. Galvin
Karen Blank
John C. Morris
Bryan M. Spann
Keith A. Johnson
Jared R. Tinklenberg
Stephen Salloway
Ronald J. Killiany
Mimi Dang
Smita Kittur
Mary Quiceno
Kaycee M. Sink
Helen Vanderswag
Erin E. Franklin
Robbartha
Kim Martin
Gaby Thai
Allyson C. Rosen
Karen L. Bell
Tracy Kendall
P. M. Doraiswamy
Kathleen Tingus
Angela Oliver
Adrian Preda
Mary L. Hynes
Laurel A. Beckett
William J. Jagust
Jeffrey M. Burns
Ronald C. Petersen
Allan I. Levey
Balebail Ashok Raj
Lawrence S. Honig
Martin R. Farlow
Richard E. Carson
Dana Mathews
David S. Knopman
Robert C. Green
Jerome A. Yesavage
Elizabeth Finger
Ann Marie Hake
David S. Geldmacher
Yaakov Stern
Raj C. Shah
M.-Marsel Mesulam
Ruth A. Mulnard
Jacobo Mintzer
Howard J. Rosen
Peggy Roberts
Joseph F. Quinn
Raymond Scott Turner
Maria T. Greig
Salvador Borges-Neto
Jeffrey Kaye
Randall Griffith
Diana R. Kerwin
Neill R. Graff-Radford
James B. Brewer
John C. Brockington
Ging-Yuek Robin Hsiung
Anant Madabhushi
Andrew E. Budson
Martha G. MacAvoy
Stephen Correia
Terence Z. Wong
Michelle Rainka
Elizabeth Oates
Alexander Norbash
Chiadi U. Onyike
Gloria Chaing
Kris Johnson
Hillel Grossman
Gary R. Conrad
Nancy Johnson
Lisa D. Ravdin
Mauricio Beccera
Reisa A. Sperling
Heather Johnson
Kristine Lipowski
Charles DeCarli
Barton Lane
Joanne L. Lord
Carl H. Sadowsky
Chris Hosein
Marissa Natelson Love
M. Ismail
Liana G. Apostolova
Dzintra Celmins
Brian R. Ott
Brittany Cerbone
Sanjay Asthana
Alice D. Brown
Neil W. Kowall
Peter A. Hardy
Andrew Kertesz
Sara S. Mason
Horacio Capote
Pauline Maillard
Stephanie Kielb
Henry Rusinek
Ellen Woo
Jeff D. Williamson
Susan De Santi
Amanda Smith
John M Olichney
Michele Assaly
Karen S. Anderson
Parianne Fatica
Brandy R. Matthews
Michael Borrie
Susan Rountree
Chuang Kuo Wu
Curtis Tatsuoka
Teresa Villena
Asha Singanamalli
Borna Bonakdarpour
Colleen S. Albers
Cynthia M. Carlsson
Bonnie S. Goldstein
Sonia Pawluczyk
Edward Coleman
Kenneth M. Spicer
Jared R. Brosch
William Brooks
Partha Sinha
Stephanie Reeder
Daniel Silverman
Robert B. Santulli
Godfrey D. Pearlson
Mark A. Mintun
Sandra Weintraub
Source :
Scientific Reports, Vol 7, Iss 1, Pp 1-14 (2017), Scientific Reports, Singanamalli, Asha; Wang, Haibo; Madabhushi, Anant; & Alzheimer’s Disease Neuroimaging Initiative,. (2017). Cascaded Multi-view Canonical Correlation (CaMCCo) for Early Diagnosis of Alzheimer's Disease via Fusion of Clinical, Imaging and Omic Features.. Scientific reports, 7(1), 8137. doi: 10.1038/s41598-017-03925-0. UC Irvine: Retrieved from: http://www.escholarship.org/uc/item/0p87p9j7
Publication Year :
2017
Publisher :
Nature Portfolio, 2017.

Abstract

The introduction of mild cognitive impairment (MCI) as a diagnostic category adds to the challenges of diagnosing Alzheimer’s Disease (AD). No single marker has been proven to accurately categorize patients into their respective diagnostic groups. Thus, previous studies have attempted to develop fused predictors of AD and MCI. These studies have two main limitations. Most do not simultaneously consider all diagnostic categories and provide suboptimal fused representations using the same set of modalities for prediction of all classes. In this work, we present a combined framework, cascaded multiview canonical correlation (CaMCCo), for fusion and cascaded classification that incorporates all diagnostic categories and optimizes classification by selectively combining a subset of modalities at each level of the cascade. CaMCCo is evaluated on a data cohort comprising 149 patients for whom neurophysiological, neuroimaging, proteomic and genomic data were available. Results suggest that fusion of select modalities for each classification task outperforms (mean AUC = 0.92) fusion of all modalities (mean AUC = 0.54) and individual modalities (mean AUC = 0.90, 0.53, 0.71, 0.73, 0.62, 0.68). In addition, CaMCCo outperforms all other multi-class classification methods for MCI prediction (PPV: 0.80 vs. 0.67, 0.63).

Details

Language :
English
ISSN :
20452322
Volume :
7
Issue :
1
Database :
OpenAIRE
Journal :
Scientific Reports
Accession number :
edsair.doi.dedup.....aab15d2f10fd541cb5a67527b04ea71c
Full Text :
https://doi.org/10.1038/s41598-017-03925-0.