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Larsenimonas suaedae sp. nov., a moderately halophilic, endophytic bacterium isolated from the halophyte Suaeda salsa
- Source :
- International journal of systematic and evolutionary microbiology. 66(8)
- Publication Year :
- 2016
-
Abstract
- A moderately halophilic, Gram-stain-negative, non-endospore-forming endophytic bacterium designated strain ST307T was isolated from the euhalophyte Suaeda salsa in Dongying, China. Strain ST307T was aerobic, rod-shaped, motile and orange–yellow-pigmented. The organism grew at NaCl concentrations of 0.6–20 % (w/v) (optimum 5–6 %, w/v), at temperatures of 5–45 °C (optimum 35 °C) and at pH 5–9 (optimum pH 7–8). It accumulated poly-β-hydroxybutyric acid and produced exopolysaccharides. The major fatty acids were C18 : 1 ω7c/C18 : 1 ω6c, C16 : 0 and C16 : 1 ω7c/C16 : 1 ω6c. The predominant lipoquinone was ubiquinone Q-9. The polar lipids consisted of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, a glycoaminolipid and a phosphoglycoaminolipid. The DNA G+C content was 60.5 mol%. Phylogenetic analyses of 16S rRNA gene sequences and concatenated atpA, rpoD and secA gene sequences revealed that the strain represents a member of the genus Larsenimonas . The closest related type strain was Larsenimonas salina M1-18T. Mean DNA–DNA relatedness values between strain ST307T and the related species L. salina M1-18T, Chromohalobacter beijerinckii DSM 7218T, C. canadensis DSM 6769T, C. israelensis DSM 6768T, C. marismortui CGMCC 1.2321T, C. nigrandesensis DSM 14323T, C. salexigens DSM 3043T and C. sarecensis DSM 15547T were 15±2−45±1 %. On the basis of phenotypic, chemotaxonomic and molecular features, strain ST307T clearly represents a novel species of the genus Larsenimonas . The name Larsenimonas suaedae sp. nov. is proposed, with ST307T (=CGMCC 1.8902T=DSM 22428T) as the type strain.
- Subjects :
- 0301 basic medicine
DNA, Bacterial
China
Sequence analysis
Ubiquinone
Polyesters
Hydroxybutyrates
Chromohalobacter beijerinckii
Chenopodiaceae
Microbiology
03 medical and health sciences
Phylogenetics
RNA, Ribosomal, 16S
Botany
Ecology, Evolution, Behavior and Systematics
Phospholipids
Phylogeny
Base Composition
biology
Strain (chemistry)
Pigmentation
Fatty Acids
Nucleic Acid Hybridization
General Medicine
Sequence Analysis, DNA
Ribosomal RNA
biology.organism_classification
16S ribosomal RNA
Halophile
Bacterial Typing Techniques
Halomonadaceae
030104 developmental biology
Bacteria
Subjects
Details
- ISSN :
- 14665034
- Volume :
- 66
- Issue :
- 8
- Database :
- OpenAIRE
- Journal :
- International journal of systematic and evolutionary microbiology
- Accession number :
- edsair.doi.dedup.....a703c172fbbb9741dddd418c6f1fb3a7