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Paraburkholderia caseinilytica sp. nov., isolated from the pine and broad-leaf mixed forest soil
- Source :
- International Journal of Systematic and Evolutionary Microbiology. 68:1963-1968
- Publication Year :
- 2018
- Publisher :
- Microbiology Society, 2018.
-
Abstract
- A novel Gram-stain-negative, aerobic, non-spore-forming, motile and rod-shaped bacterial strain, designated HM451T, was isolated from forest soil sampled at the Dinghushan Biosphere Reserve, Guangdong Province, PR China (112° 31′ E 23° 10′ N). It grew optimally at 28 °C, pH 5.0–6.0 and in the presence of 0–2.5 % (w/v) NaCl on R2A medium. Strain HM451T was closely related to Paraburkholderia mimosarum NBRC 106338T (98.6 % 16S rRNA gene sequence similarity), Paraburkholderia heleia NBRC 101817T (98.4 %) and Paraburkholderia silvatlantica SRMrh-20T (98.0 %). The 16S rRNA gene sequence analysis showed that strain HM451T and the three closely related strains formed a clade within the genus Paraburkholderia , but was clearly separated from the established species. The DNA–DNA relatedness value between strain HM451T and its phylogenetically closest relative, P. mimosarum NBRC 106338T, was much lower than 70 %. Strain HM451T contained ubiquinone 8 as the major respiratory quinone. Major fatty acids were C16 : 0, C17 : 0cyclo and summed feature 8 (C18 : 1ω7c and/or C18 : 1 ω6c). The DNA G+C content of strain HM451T was 65.4 mol%. The major polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unidentified aminophospholipids, one unidentified aminolipid and a polar lipid. The phenotypic, chemotaxonomic and phylogenetic data showed that strain HM451T represents a novel species of the genus Paraburkholderia , for which the name Paraburkholderia caseinilytica sp. nov. is proposed. The type strain is HM451T (=GDMCC 1.1190T=LMG 30092T).
- Subjects :
- DNA, Bacterial
0301 basic medicine
China
food.ingredient
Ubiquinone
Forests
Biology
Microbiology
03 medical and health sciences
chemistry.chemical_compound
food
Phylogenetics
RNA, Ribosomal, 16S
Botany
Clade
Phylogeny
Soil Microbiology
Ecology, Evolution, Behavior and Systematics
Phosphatidylglycerol
Base Composition
Phylogenetic tree
Strain (chemistry)
Burkholderiaceae
Fatty Acids
Nucleic Acid Hybridization
Sequence Analysis, DNA
General Medicine
Paraburkholderia
16S ribosomal RNA
Bacterial Typing Techniques
030104 developmental biology
chemistry
DNA
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 68
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....a69d41b5986c413bc8054e84a62d343b
- Full Text :
- https://doi.org/10.1099/ijsem.0.002774