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Genome-wide association study of PR interval in Hispanics/Latinos identifies novel locus at ID2
- Source :
- Heart (British Cardiac Society), vol 104, iss 11
- Publication Year :
- 2017
- Publisher :
- BMJ, 2017.
-
Abstract
- ObjectivePR interval (PR) is a heritable electrocardiographic measure of atrial and atrioventricular nodal conduction. Changes in PR duration may be associated with atrial fibrillation, heart failure and all-cause mortality. Hispanic/Latino populations have high burdens of cardiovascular morbidity and mortality, are highly admixed and represent exceptional opportunities for novel locus identification. However, they remain chronically understudied. We present the first genome-wide association study (GWAS) of PR in 14 756 participants of Hispanic/Latino ancestry from three studies.MethodsStudy-specific summary results of the association between 1000 Genomes Phase 1 imputed single-nucleotide polymorphisms (SNPs) and PR assumed an additive genetic model and were adjusted for global ancestry, study centre/region and clinical covariates. Results were combined using fixed-effects, inverse variance weighted meta-analysis. Sequential conditional analyses were used to identify independent signals. Replication of novel loci was performed in populations of Asian, African and European descent. ENCODE and RoadMap data were used to annotate results.ResultsWe identified a novel genome-wide association (P−8) with PR at ID2 (rs6730558), which replicated in Asian and European populations (PConclusionsOur results suggest that genetic determinants of PR are consistent across race/ethnicity, but extending studies to admixed populations can identify novel associations, underscoring the importance of conducting genetic studies in diverse populations.
- Subjects :
- Male
0301 basic medicine
Genotype
Clinical Sciences
Locus (genetics)
Single-nucleotide polymorphism
Genome-wide association study
Cardiorespiratory Medicine and Haematology
030204 cardiovascular system & hematology
Cardiovascular
Electrocardiography
03 medical and health sciences
0302 clinical medicine
Atrial Fibrillation
Genetic model
Genetic variation
Genetics
Humans
Medicine
ECG/electrocardiogram
Polymorphism
PR interval
1000 Genomes Project
Allele
Inhibitor of Differentiation Protein 2
business.industry
Prevention
Human Genome
Single Nucleotide
Hispanic or Latino
Middle Aged
Heart Disease
Good Health and Well Being
030104 developmental biology
Cardiovascular System & Hematology
genome-wide association studies
Atrioventricular Node
Female
epidemiology
Cardiology and Cardiovascular Medicine
business
Genome-Wide Association Study
Subjects
Details
- ISSN :
- 1468201X and 13556037
- Volume :
- 104
- Database :
- OpenAIRE
- Journal :
- Heart
- Accession number :
- edsair.doi.dedup.....a69d4046b0545bb5b6e8ac54c6703dd2