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Feasibility of melting fingerprint obtained from ISSR-HRM curves for marine mammal species identification
- Source :
- PeerJ, Vol 9, p e11689 (2021), PeerJ
- Publication Year :
- 2021
- Publisher :
- PeerJ Inc., 2021.
-
Abstract
- Currently, species identification of stranded marine mammals mostly relies on morphological features, which has inherent challenges. The use of genetic information for marine mammal species identification remains limited, therefore, new approaches that can contribute to a better monitoring of stranded species are needed. In that context, the ISSR-HRM method we have proposed offers a new approach for marine mammal species identification. Consequently, new approaches need to be developed to identify individuals at the species level. Eight primers of the ISSR markers were chosen for HRM analysis resulting in ranges of accuracy of 56.78–75.50% and 52.14–75.93% in terms of precision, while a degree of sensitivity of more than 80% was recorded when each single primer was used. The ISSR-HRM primer combinations revealed a success rate of 100% in terms of discrimination for all marine mammals included in this study. Furthermore, ISSR-HRM analysis was successfully employed in determining marine mammal discrimination among varying marine mammal species. Thus, ISSR-HRM analysis could serve as an effective alternative tool in the species identification process. This option would offer researchers a heightened level of convenience in terms of its performance and success rate. It would also offer field practice to veterinarians, biologists and other field-related people a greater degree of ease with which they could interpret results when effectively classifying stranded marine mammals. However, further studies with more samples and with a broader geographical scope will be required involving distinct populations to account for the high degree of intraspecific variability in cetaceans and to demonstrate the range of applications of this approach.
- Subjects :
- 0106 biological sciences
Veterinary Medicine
Dugong
Range (biology)
Context (language use)
Marine Biology
010603 evolutionary biology
01 natural sciences
General Biochemistry, Genetics and Molecular Biology
Intraspecific competition
03 medical and health sciences
Marine mammal
Species level
Fingerprint
Species identification
Molecular Biology
Melting temperature
030304 developmental biology
Dolphin
0303 health sciences
biology
General Neuroscience
ISSR
General Medicine
biology.organism_classification
Evolutionary biology
Medicine
General Agricultural and Biological Sciences
Zoology
Biotechnology
Subjects
Details
- Language :
- English
- ISSN :
- 21678359
- Volume :
- 9
- Database :
- OpenAIRE
- Journal :
- PeerJ
- Accession number :
- edsair.doi.dedup.....a5b799e755320059ccf5bb54fbf19d36