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The Bacteriophage pEp_SNUABM_08 Is a Novel Singleton Siphovirus with High Host Specificity for Erwinia pyrifoliae

Authors :
Young-Min Lee
Sang Guen Kim
Sung Bin Lee
Jungkum Park
Jun Kwon
Jeong Woo Kang
Eunjung Roh
Kevin Cho
Sang Wha Kim
Se Chang Park
Won Joon Jung
Sib Sankar Giri
Source :
Viruses, Volume 13, Issue 7, Viruses, Vol 13, Iss 1231, p 1231 (2021)
Publication Year :
2021
Publisher :
Multidisciplinary Digital Publishing Institute, 2021.

Abstract

Species belonging to the genus Erwinia are predominantly plant pathogens. A number of bacteriophages capable of infecting Erwinia have been used for the control of plant diseases such as fire blight. Public repositories provide the complete genome information for such phages, which includes genomes ranging from 30 kb to 350 kb in size. However, limited information is available regarding bacteriophages belonging to the family Siphoviridae. A novel lytic siphophage, pEp_SNUABM_08, which specifically infects Erwinia pyrifoliae, was isolated from the soil of an affected apple orchard in South Korea. A comprehensive genome analysis was performed using the Erwinia-infecting siphophage. The whole genome of pEp_SNUABM_08 comprised 62,784 bp (GC content, 57.24%) with 79 open reading frames. The genomic characteristics confirmed that pEp_SNUABM_08 is a singleton lytic bacteriophage belonging to the family Siphoviridae, and no closely related phages have been reported thus far. Our study not only characterized a unique phage, but also provides insight into the genetic diversity of Erwinia bacteriophages.

Details

Language :
English
ISSN :
19994915
Database :
OpenAIRE
Journal :
Viruses
Accession number :
edsair.doi.dedup.....a4f9949d4f0826bf37c18786214aad21
Full Text :
https://doi.org/10.3390/v13071231