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Pressure dependence of backbone chemical shifts in the model peptides Ac-Gly-Gly-Xxx-Ala-NH2
- Source :
- Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual), Universidade de São Paulo (USP), instacron:USP
- Publication Year :
- 2016
- Publisher :
- Springer Science and Business Media LLC, 2016.
-
Abstract
- For a better understanding of nuclear magnetic resonance (NMR) detected pressure responses of folded as well as unstructured proteins the availability of data from well-defined model systems are indispensable. In this work we report the pressure dependence of chemical shifts of the backbone atoms 1Hα, 13Cα and 13C′ in the protected tetrapeptides Ac-Gly-Gly-Xxx-Ala-NH2 (Xxx one of the 20 canonical amino acids). Contrary to expectation the chemical shifts of these nuclei have a nonlinear dependence on pressure in the range from 0.1 to 200 MPa. The polynomial pressure coefficients B 1 and B 2 are dependent on the type of amino acid studied. The coefficients of a given nucleus show significant linear correlations suggesting that the NMR observable pressure effects in the different amino acids have at least partly the same physical cause. In line with this observation the magnitude of the second order coefficients of nuclei being direct neighbors in the chemical structure are also weakly correlated.
- Subjects :
- Work (thermodynamics)
Magnetic Resonance Spectroscopy
Chemical structure
PEPTÍDEOS
Peptide
010402 general chemistry
01 natural sciences
Biochemistry
Nuclear magnetic resonance
Pressure
medicine
Amino Acid Sequence
Amino Acids
Nuclear Magnetic Resonance, Biomolecular
Spectroscopy
chemistry.chemical_classification
010405 organic chemistry
Chemical shift
Pressure dependence
Random coil
0104 chemical sciences
Amino acid
Crystallography
medicine.anatomical_structure
Models, Chemical
chemistry
Peptides
Nucleus
Subjects
Details
- ISSN :
- 15735001 and 09252738
- Volume :
- 65
- Database :
- OpenAIRE
- Journal :
- Journal of Biomolecular NMR
- Accession number :
- edsair.doi.dedup.....a4c726d69c26397482f29638c3a5807b
- Full Text :
- https://doi.org/10.1007/s10858-016-0030-4