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Pressure dependence of backbone chemical shifts in the model peptides Ac-Gly-Gly-Xxx-Ala-NH2

Authors :
Joerg Koehler
Markus Beck Erlach
Edson Crusca
Werner Kremer
Claudia Elisabeth Munte
Hans Robert Kalbitzer
Source :
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual), Universidade de São Paulo (USP), instacron:USP
Publication Year :
2016
Publisher :
Springer Science and Business Media LLC, 2016.

Abstract

For a better understanding of nuclear magnetic resonance (NMR) detected pressure responses of folded as well as unstructured proteins the availability of data from well-defined model systems are indispensable. In this work we report the pressure dependence of chemical shifts of the backbone atoms 1Hα, 13Cα and 13C′ in the protected tetrapeptides Ac-Gly-Gly-Xxx-Ala-NH2 (Xxx one of the 20 canonical amino acids). Contrary to expectation the chemical shifts of these nuclei have a nonlinear dependence on pressure in the range from 0.1 to 200 MPa. The polynomial pressure coefficients B 1 and B 2 are dependent on the type of amino acid studied. The coefficients of a given nucleus show significant linear correlations suggesting that the NMR observable pressure effects in the different amino acids have at least partly the same physical cause. In line with this observation the magnitude of the second order coefficients of nuclei being direct neighbors in the chemical structure are also weakly correlated.

Details

ISSN :
15735001 and 09252738
Volume :
65
Database :
OpenAIRE
Journal :
Journal of Biomolecular NMR
Accession number :
edsair.doi.dedup.....a4c726d69c26397482f29638c3a5807b
Full Text :
https://doi.org/10.1007/s10858-016-0030-4