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Evolution of Transcriptional Control of the IgH Locus: Characterization, Expression, and Function of TF12/HEB Homologs of the Catfish
- Source :
- The Journal of Immunology. 173:5476-5484
- Publication Year :
- 2004
- Publisher :
- The American Association of Immunologists, 2004.
-
Abstract
- The transcriptional enhancer (Eμ3′) of the IgH locus of the channel catfish, Ictalurus punctatus, differs from enhancers of the mammalian IgH locus in terms of its position, structure, and function. Transcription factors binding to multiple octamer motifs and a single μE5 motif (an E-box site, consensus CANNTG) interact for its function. E-box binding transcription factors of the class I basic helix-loop-helix family were cloned from a catfish B cell cDNA library in this study, and homologs of TF12/HEB were identified as the most highly represented E-proteins. Two alternatively spliced forms of catfish TF12 (termed CFEB1 and -2) were identified and contained regions homologous to the basic helix-loop-helix and activation domains of other vertebrate E-proteins. CFEB message is widely expressed, with CFEB1 message predominating over that of CFEB2. Both CFEB1 and -2 strongly activated transcription from a μE5-dependent artificial promoter. In catfish B cells, CFEB1 and -2 also activated transcription from the core region of the catfish IgH enhancer (Eμ3′) in a manner dependent on the presence of the μE5 site. Both CFEB1 and -2 bound the μE5 motif, and formed both homo- and heterodimers. CFEB1 and -2 were weakly active or inactive (in a promoter-dependent fashion) in mammalian B-lineage cells. Although E-proteins have been highly conserved in vertebrate evolution, the present results indicate that, at the phylogenetic level of a teleost fish, the TF12/HEB homolog differs from that of mammals in terms of 1) its high level of expression and 2) the presence of isoforms generated by alternative RNA processing.
- Subjects :
- Genetic Markers
Gene isoform
Transcription, Genetic
Molecular Sequence Data
Immunology
Biology
Cell Line
Evolution, Molecular
Transcription (biology)
Sequence Homology, Nucleic Acid
Basic Helix-Loop-Helix Transcription Factors
RNA Precursors
Transcriptional regulation
Animals
Protein Isoforms
Immunology and Allergy
Histone octamer
Cloning, Molecular
RNA Processing, Post-Transcriptional
Enhancer
Transcription factor
Cell Line, Transformed
Genetics
Binding Sites
Base Sequence
Immunoglobulin mu-Chains
cDNA library
Helix-Loop-Helix Motifs
DNA-Binding Proteins
Ictaluridae
Alternative Splicing
Enhancer Elements, Genetic
Organ Specificity
Immunoglobulin Heavy Chains
Transcription Factors
Catfish
Subjects
Details
- ISSN :
- 15506606 and 00221767
- Volume :
- 173
- Database :
- OpenAIRE
- Journal :
- The Journal of Immunology
- Accession number :
- edsair.doi.dedup.....a49c2179c7d0671ecdc9237de17bc28e
- Full Text :
- https://doi.org/10.4049/jimmunol.173.9.5476