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A novel alternative splicing-based prediction model for uteri corpus endometrial carcinoma

Authors :
Jin-shu Pang
Gang Chen
Zu-cheng Xie
Li Gao
Tian-tian Li
Source :
Aging (Albany NY)
Publication Year :
2019
Publisher :
Impact Journals, LLC, 2019.

Abstract

Alternative splicing (AS) is crucial a mechanism by which the complexity of mammalian and viral proteom increased overwhelmingly. There lacks systematic and comprehensive analysis of the prognostic significance of AS profiling landscape for uteri corpus endometrial carcinoma (UCEC). In this study, univariate and multivariate Cox regression analyses were conducted to identify candidate survival-associated AS events curated from SpliceSeq for the construction of prognostic index (PI) models. A correlation network between splicing factor-related AS events and significant survival-associated AS events were constructed using Cytoscape 3.5. As consequence, 28281 AS events from 8137 genes were detected from 506 UCEC patients, including 2630 survival-associated AS events. Kaplan Meier survival analysis revealed that six of the seven PI models (AD, AP, AT, ME, RI and ALL) exhibited good performance in stratifying the prognosis of low risk and high risk group (P

Details

ISSN :
19454589
Volume :
11
Database :
OpenAIRE
Journal :
Aging
Accession number :
edsair.doi.dedup.....a44724f225e43869b47a7b882ac72da2