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A novel alternative splicing-based prediction model for uteri corpus endometrial carcinoma
- Source :
- Aging (Albany NY)
- Publication Year :
- 2019
- Publisher :
- Impact Journals, LLC, 2019.
-
Abstract
- Alternative splicing (AS) is crucial a mechanism by which the complexity of mammalian and viral proteom increased overwhelmingly. There lacks systematic and comprehensive analysis of the prognostic significance of AS profiling landscape for uteri corpus endometrial carcinoma (UCEC). In this study, univariate and multivariate Cox regression analyses were conducted to identify candidate survival-associated AS events curated from SpliceSeq for the construction of prognostic index (PI) models. A correlation network between splicing factor-related AS events and significant survival-associated AS events were constructed using Cytoscape 3.5. As consequence, 28281 AS events from 8137 genes were detected from 506 UCEC patients, including 2630 survival-associated AS events. Kaplan Meier survival analysis revealed that six of the seven PI models (AD, AP, AT, ME, RI and ALL) exhibited good performance in stratifying the prognosis of low risk and high risk group (P
- Subjects :
- Oncology
Aging
medicine.medical_specialty
Biology
alternative splicing
Splicing factor
Internal medicine
Biomarkers, Tumor
medicine
Carcinoma
Humans
Survival analysis
Receiver operating characteristic
uteri corpus endometrial carcinoma
Proportional hazards model
Gene Expression Profiling
Uterus
prognostic index
Alternative splicing
Univariate
Cell Biology
medicine.disease
Survival Analysis
Endometrial Neoplasms
Gene Expression Regulation, Neoplastic
splicing factor
RNA splicing
Female
Research Paper
Subjects
Details
- ISSN :
- 19454589
- Volume :
- 11
- Database :
- OpenAIRE
- Journal :
- Aging
- Accession number :
- edsair.doi.dedup.....a44724f225e43869b47a7b882ac72da2