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The B73 maize genome: complexity, diversity, and dynamics
- Source :
- Science, Science, American Association for the Advancement of Science, 2009, 326 (5956), pp.1112-5. ⟨10.1126/science.1178534⟩
- Publication Year :
- 2009
- Publisher :
- HAL CCSD, 2009.
-
Abstract
- A-Maize-ing Maize is one of our oldest and most important crops, having been domesticated approximately 9000 years ago in central Mexico. Schnable et al. (p. 1112 ; see the cover) present the results of sequencing the B73 inbred maize line. The findings elucidate how maize became diploid after an ancestral doubling of its chromosomes and reveals transposable element movement and activity and recombination. Vielle-Calzada et al. (p. 1078 ) have sequenced the Palomero Toluqueño ( Palomero ) landrace, a highland popcorn from Mexico, which, when compared to the B73 line, reveals multiple loci impacted by domestication. Swanson-Wagner et al. (p. 1118 ) exploit possession of the genome to analyze expression differences occurring between lines. The identification of single nucleotide polymorphisms and copy number variations among lines was used by Gore et al. (p. 1115 ) to generate a Haplotype map of maize. While chromosomal diversity in maize is high, it is likely that recombination is the major force affecting the levels of heterozygosity in maize. The availability of the maize genome will help to guide future agricultural and biofuel applications (see the Perspective by Feuillet and Eversole ).
- Subjects :
- 0106 biological sciences
MESH: Genome, Plant
MESH: Sequence Analysis, DNA
MESH: Zea mays
MESH: Base Sequence
MESH: RNA, Plant
[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics, Phylogenetics and taxonomy
01 natural sciences
Genome
Divergence
MESH: Ploidies
MESH: DNA Methylation
MESH: Genes, Plant
Nested association mapping
Copy-number variation
MESH: Genetic Variation
MESH: Chromosomes, Plant
2. Zero hunger
Genetics
0303 health sciences
Multidisciplinary
[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM]
[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]
[SDV.BBM.MN]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular Networks [q-bio.MN]
Arabidopsis-Thaliana
[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]
Retrotransposons
MESH: DNA Transposable Elements
Helitron
MESH: Centromere
MESH: Recombination, Genetic
MESH: DNA Copy Number Variations
Ploidy
Transposable element
Genome evolution
Evolution
[SDV.BC]Life Sciences [q-bio]/Cellular Biology
Biology
Methylation
[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics
03 medical and health sciences
MESH: Retroelements
MESH: Inbreeding
[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN]
Zea-Mays
[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biochemistry [q-bio.BM]
MESH: DNA, Plant
Gene
030304 developmental biology
MESH: Molecular Sequence Data
Transposable Elements
[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology
Plant
15. Life on land
MESH: Crops, Agricultural
[SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breeding
Genes
[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]
MESH: Chromosome Mapping
MESH: MicroRNAs
010606 plant biology & botany
Subjects
Details
- Language :
- English
- ISSN :
- 00368075 and 10959203
- Database :
- OpenAIRE
- Journal :
- Science, Science, American Association for the Advancement of Science, 2009, 326 (5956), pp.1112-5. ⟨10.1126/science.1178534⟩
- Accession number :
- edsair.doi.dedup.....a38c14fd35f408bb7354afd1a6486399
- Full Text :
- https://doi.org/10.1126/science.1178534⟩