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Evaluation of Transport Media and Specimen Transport Conditions for the Detection of SARS-CoV-2 by Use of Real-Time Reverse Transcription-PCR
- Source :
- Journal of Clinical Microbiology
- Publication Year :
- 2020
- Publisher :
- American Society for Microbiology, 2020.
-
Abstract
- The global coronavirus (CoV) disease 2019 (COVID-19) pandemic has resulted in a worldwide shortage of viral transport media and raised questions about specimen stability. The objective of this study was to determine the stability of severe acute respiratory syndrome CoV 2 (SARS-CoV-2) RNA in specimen transport media under various storage conditions. Transport media tested included UTM, UTM-RT, ESwab, M4, and saline (0.9% NaCl). Specimen types tested included nasopharyngeal/oropharyngeal swabs in the above-named transport media, bronchoalveolar lavage (BAL) fluid, and sputum.<br />The global coronavirus (CoV) disease 2019 (COVID-19) pandemic has resulted in a worldwide shortage of viral transport media and raised questions about specimen stability. The objective of this study was to determine the stability of severe acute respiratory syndrome CoV 2 (SARS-CoV-2) RNA in specimen transport media under various storage conditions. Transport media tested included UTM, UTM-RT, ESwab, M4, and saline (0.9% NaCl). Specimen types tested included nasopharyngeal/oropharyngeal swabs in the above-named transport media, bronchoalveolar lavage (BAL) fluid, and sputum. A high-titer SARS-CoV-2 remnant patient specimen was spiked into pooled SARS-CoV-2 RNA-negative specimen remnants for the various medium types. Aliquots of samples were stored at 18°C to 26°C, 2°C to 8°C, and −10°C to −30°C and then tested at time points up to 14 days. Specimens consistently yielded amplifiable RNA with mean cycle threshold differences of
- Subjects :
- 0301 basic medicine
Microbiology (medical)
Coronavirus disease 2019 (COVID-19)
transport media
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
viruses
030106 microbiology
Pneumonia, Viral
Economic shortage
Biology
medicine.disease_cause
Microbiology
Specimen Handling
03 medical and health sciences
Betacoronavirus
0302 clinical medicine
COVID-19 Testing
Laboratory Chemicals
Virology
medicine
Humans
030212 general & internal medicine
Pandemics
Coronavirus
Cycle threshold
medicine.diagnostic_test
Clinical Laboratory Techniques
Reverse Transcriptase Polymerase Chain Reaction
SARS-CoV-2
Special Issue
Temperature
COVID-19
respiratory system
RNA stability
transport conditions
respiratory tract diseases
Reverse transcription polymerase chain reaction
Bronchoalveolar lavage
Sputum
medicine.symptom
Coronavirus Infections
Subjects
Details
- Language :
- English
- ISSN :
- 1098660X and 00951137
- Database :
- OpenAIRE
- Journal :
- Journal of Clinical Microbiology
- Accession number :
- edsair.doi.dedup.....a3178775a11c753b34ea1920e2016371
- Full Text :
- https://doi.org/10.1128/jcm.00708-20