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Single mutation at the intersubunit interface confers extra efficiency to Cu,Zn superoxide dismutase
- Publication Year :
- 2016
-
Abstract
- The Val28-->Gly single mutant at the subunit interface of Cu,Zn superoxide dismutase from Photobacterium leiognathi displays a k(cat)/K(M) value of 1.7x10(10) M(-1) s(-1), twice that of the native enzyme. Analysis of the three-dimensional structure indicates that the active site Cu,Zn center is not perturbed, slight structural deviations being only localized in proximity of the mutation site. The enzyme-substrate association rate, calculated by Brownian dynamics simulation, is identical for both enzymes, indicating that the higher catalytic efficiency of the Val28-->Gly mutant is not due to a more favorable electrostatic potential distribution. This result demonstrates the occurrence of an intramolecular communication between the mutation site and the catalytic center, about 18 A away and indicates a new strategy to encode extra efficiency within other members of this enzymatic family.
- Subjects :
- Dynamical property
Stereochemistry
Protein subunit
Mutant
Biophysics
Intersubunit contact
Biochemistry
Substrate Specificity
Superoxide dismutase
Photobacterium leiognathi
Structural Biology
Genetics
Binding site
Molecular Biology
chemistry.chemical_classification
Binding Sites
biology
Settore BIO/11
Photobacterium
Superoxide Dismutase
Active site
Cell Biology
Extra efficient enzyme
Hydrogen-Ion Concentration
Protein Structure, Tertiary
Protein Subunits
Enzyme
chemistry
Amino Acid Substitution
Mutation (genetic algorithm)
Mutation
biology.protein
Genetic Engineering
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....a2078529aa06b38bee53c2a68ee6cd1d