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Sinorhodobacter populi sp. nov., isolated from the symptomatic bark tissue of Populus × euramericana canker
- Source :
- International journal of systematic and evolutionary microbiology. 69(4)
- Publication Year :
- 2019
-
Abstract
- We isolated five novel bacterial strains from symptomatic bark tissue of Populus × euramericana canker that were Gram-stain-negative, non-motile, aerobic oxidase-negative and catalase-positive. Growth occurred at 10–41 °C and at pH 5.0–7.0, with optimum growth at 30 °C and pH 7.0. Additionally, growth occurred in conditions of 0–5 % (w/v) salinity, but not above 7 % NaCl. The 16S rRNA gene sequences of the novel strains shared the highest similarity with Sinorhodobacter ferrireducens SgZ-3T (97.1 %). The average nucleotide identity values between the novel strains and two type strains (S.inorhodobacter ferrireducens CCTCC AB2012026T and ‘ S inorhodobacter hungdaonensis’ CGMCC 1.12963T) were 78.4–78.9 %, which were lower than the proposed species boundary cut-off (95–96 %). The main polar lipids were phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified lipid and phosphatidylcholine. The main respiratory quinone was Q-10, and major fatty acids were C18 : 1ω7c and/or C18 : 1 ω6c. Based on data from a polyphasic taxonomy study, the novel strains represent a novel species of the genus Sinorhodobacter , for which the name Sinorhodobacter populi sp. nov. is proposed. The type strain is sk2b1T (=CFCC 14580T=KCTC 52802T).
- Subjects :
- DNA, Bacterial
China
Biology
Microbiology
chemistry.chemical_compound
Phosphatidylcholine
RNA, Ribosomal, 16S
Populus euramericana
medicine
Rhodobacteraceae
Ecology, Evolution, Behavior and Systematics
Sinorhodobacter ferrireducens
Phospholipids
Phylogeny
Plant Diseases
Phosphatidylglycerol
Canker
Base Composition
Fatty Acids
General Medicine
Sequence Analysis, DNA
16S ribosomal RNA
medicine.disease
Bacterial Typing Techniques
Cardenolides
Populus
chemistry
Plant Bark
Taxonomy (biology)
Sinorhodobacter
Subjects
Details
- ISSN :
- 14665034
- Volume :
- 69
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- International journal of systematic and evolutionary microbiology
- Accession number :
- edsair.doi.dedup.....a0bf927f9c5f7fa3ab0a70451271b50c