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A combined literature and in silico analysis enlightens the role of the NDRG family in the gut

Authors :
Nikhil Thapar
Conor J. McCann
Manon van Engeland
Erwin Brosens
Simone L. Schonkeren
Nathalie Vaes
Veerle Melotte
Alexander Koch
Robert M.W. Hofstra
Clinical Genetics
Source :
Biochimica et Biophysica Acta-General Subjects, 1862(10), 2140-2151. Elsevier
Publication Year :
2018

Abstract

Background The N-Myc Downstream-Regulated Gene (NDRG) family comprises four members that function in cellular processes like proliferation and differentiation. While NDRG1 and NDRG2 are extensively studied, knowledge regarding NDRG3 and NDRG4, despite its recognition as a well-established early-detection marker for colorectal cancer (Cologuard®), is sparse. Scope of review To summarize expression, biomarker potential and functional mechanisms of the NDRGs in the developing, mature and cancerous gut, we combine current literature and in silico analyses from the TCGA-database, GTEX Project, E14.5 mouse intestine and enteric neural crest cells, and an RNA-sequencing time-series of human embryonic colonic samples. Major conclusions This study reveals that all members display a differential expression pattern in the gut and that NDRG1, NDRG2 and NDRG4 (1) can serve as biomarker for colorectal cancer and (2) have tumor suppressive properties mainly affecting cell proliferation and epithelial-mesenchymal transition. General significance Similar effects of the NDRGs on the key-hallmarks of cancer, could implicate analogous functions in other tissue/cancer types.

Details

ISSN :
03044165
Volume :
1862
Issue :
10
Database :
OpenAIRE
Journal :
Biochimica et Biophysica Acta-General Subjects
Accession number :
edsair.doi.dedup.....9ee52eab3a1d7b445081e6f2c6545df3
Full Text :
https://doi.org/10.1016/j.bbagen.2018.07.004