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A combined literature and in silico analysis enlightens the role of the NDRG family in the gut
- Source :
- Biochimica et Biophysica Acta-General Subjects, 1862(10), 2140-2151. Elsevier
- Publication Year :
- 2018
-
Abstract
- Background The N-Myc Downstream-Regulated Gene (NDRG) family comprises four members that function in cellular processes like proliferation and differentiation. While NDRG1 and NDRG2 are extensively studied, knowledge regarding NDRG3 and NDRG4, despite its recognition as a well-established early-detection marker for colorectal cancer (Cologuard®), is sparse. Scope of review To summarize expression, biomarker potential and functional mechanisms of the NDRGs in the developing, mature and cancerous gut, we combine current literature and in silico analyses from the TCGA-database, GTEX Project, E14.5 mouse intestine and enteric neural crest cells, and an RNA-sequencing time-series of human embryonic colonic samples. Major conclusions This study reveals that all members display a differential expression pattern in the gut and that NDRG1, NDRG2 and NDRG4 (1) can serve as biomarker for colorectal cancer and (2) have tumor suppressive properties mainly affecting cell proliferation and epithelial-mesenchymal transition. General significance Similar effects of the NDRGs on the key-hallmarks of cancer, could implicate analogous functions in other tissue/cancer types.
- Subjects :
- EXPRESSION
0301 basic medicine
Colorectal cancer
In silico
Tumor suppressors
Biophysics
Muscle Proteins
Cell Cycle Proteins
Nerve Tissue Proteins
HUMAN COLON-CARCINOMA
Biology
Biochemistry
COLORECTAL-CANCER
CELL-PROLIFERATION
03 medical and health sciences
medicine
Animals
Humans
Computer Simulation
Epithelial–mesenchymal transition
Molecular Biology
Gastrointestinal Neoplasms
N-MYC
Tumor Suppressor Proteins
DOWNSTREAM-REGULATED GENE-1
Intestinal tract
N-myc downstream-regulated gene
Intracellular Signaling Peptides and Proteins
Neural crest
Cancer
medicine.disease
EPITHELIAL-MESENCHYMAL TRANSITION
Embryonic stem cell
Review Literature as Topic
030104 developmental biology
Cancer research
Biomarker (medicine)
METASTASIS SUPPRESSOR NDRG1
TUMOR INVASION
STOOL DNA TEST
Biomarkers
Function (biology)
Subjects
Details
- ISSN :
- 03044165
- Volume :
- 1862
- Issue :
- 10
- Database :
- OpenAIRE
- Journal :
- Biochimica et Biophysica Acta-General Subjects
- Accession number :
- edsair.doi.dedup.....9ee52eab3a1d7b445081e6f2c6545df3
- Full Text :
- https://doi.org/10.1016/j.bbagen.2018.07.004