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Complete genome sequence of Desulfohalobium retbaense type strain (HR100T)
- Source :
- Standards in Genomic Sciences
- Publication Year :
- 2010
- Publisher :
- Michigan State University, 2010.
-
Abstract
- Desulfohalobium retbaense (Ollivier et al. 1991) is the type species of the polyphyletic genus Desulfohalobium, which comprises, at the time of writing, two species and represents the family Desulfohalobiaceae within the Deltaproteobacteria. D. retbaense is a moderately halophilic sulfate-reducing bacterium, which can utilize H2 and a limited range of organic substrates, which are incompletely oxidized to acetate and CO2, for growth. The type strain ${\rm HR}_{100}^{\rm T}$ was isolated from sediments of the hypersaline Retba Lake in Senegal. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the family Desulfohalobiaceae. The 2,909,567 bp genome (one chromosome and a 45,263 bp plasmid) with its 2,552 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
- Subjects :
- Deltaproteobacteria
moderately halophilic
sulfate-reducer
medicine.disease_cause
Genome
Plasmid
mesophile
GEBA
Proteobacteria
Genetics
medicine
Desulfohalobiaceae
Gene
Desulfohalobium retbaense
Whole genome sequencing
biology
hypersaline lake
strictly anaerobic
Chromosome
biology.organism_classification
Gram-negative
Short Genome Reports
Type species
hydrogen utilization
Subjects
Details
- Language :
- English
- ISSN :
- 19443277
- Volume :
- 2
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- Standards in Genomic Sciences
- Accession number :
- edsair.doi.dedup.....9d3c606db756820adfedd09372b356e9