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Different effects of the TAR structure on HIV-1 and HIV-2 genomic RNA translation

Authors :
Taran Limousin
Théophile Ohlmann
Ricardo Soto-Rifo
Didier Decimo
Emiliano P. Ricci
Olivier Moncorgé
Andrea Cimarelli
Mary-Anne Trabaud
Paulina S. Rubilar
Patrice Andre
Virologie humaine
École normale supérieure de Lyon (ENS de Lyon)-IFR128-Institut National de la Santé et de la Recherche Médicale (INSERM)
Immunité infection vaccination (I2V)
Université Claude Bernard Lyon 1 (UCBL)
Université de Lyon-Université de Lyon-IFR128-Institut National de la Santé et de la Recherche Médicale (INSERM)
Hospices Civils de Lyon (HCL)
Université de Lyon
École normale supérieure - Lyon (ENS Lyon)-IFR128-Institut National de la Santé et de la Recherche Médicale (INSERM)
Aptanomics
CIMARELLI, Andrea
Source :
Nucleic Acids Research, Nucleic Acids Research, 2012, 40 (6), pp.2653-2667. ⟨10.1093/nar/gkr1093⟩, Nucleic Acids Research, Oxford University Press, 2012, 40 (6), pp.2653-67. ⟨10.1093/nar/gkr1093⟩, Nucleic Acids Research, Oxford University Press, 2012, 40 (6), pp.2653-2667. ⟨10.1093/nar/gkr1093⟩, Nucleic Acids Research, 2012, 40 (6), pp.2653-67. ⟨10.1093/nar/gkr1093⟩
Publication Year :
2011
Publisher :
Oxford University Press (OUP), 2011.

Abstract

International audience; The 5′-untranslated region (5′-UTR) of the genomic RNA of human immunodeficiency viruses type-1 (HIV-1) and type-2 (HIV-2) is composed of highly structured RNA motifs essential for viral replication that are expected to interfere with Gag and Gag-Pol translation. Here, we have analyzed and compared the properties by which the viral 5′-UTR drives translation from the genomic RNA of both human immunodeficiency viruses. Our results showed that translation from the HIV-2 gRNA was very poor compared to that of HIV-1. This was rather due to the intrinsic structural motifs in their respective 5′-UTR without involvement of any viral protein. Further investigation pointed to a different role of TAR RNA, which was much inhibitory for HIV-2 translation. Altogether, these data highlight important structural and functional differences between these two human pathogens.

Details

ISSN :
13624962 and 03051048
Volume :
40
Database :
OpenAIRE
Journal :
Nucleic Acids Research
Accession number :
edsair.doi.dedup.....9cd2720c9f3b1f38ab1f2043f5b1e934
Full Text :
https://doi.org/10.1093/nar/gkr1093