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Mitogenomic characterization and systematic placement of the Congo blind barb Caecobarbus geertsii (Cypriniformes: Cyprinidae)
- Source :
- International Journal of Biological Macromolecules. 161:292-298
- Publication Year :
- 2020
- Publisher :
- Elsevier BV, 2020.
-
Abstract
- This study presents the first complete mitochondrial genome (mitogenome) of Caecobarbus geertsii, the Congo blind barb, a cave-dwelling, CITES-protected, cyprinid fish endemic to the Lower Congo basin (DRC). The length of the circular mitogenome is 16,565 base pairs. The 13 protein coding genes, 2 ribosomal RNA genes and 22 transfer RNA genes are similar in position and direction to those of other members of the family Cyprinidae. Phylogenetic analyses including 28 complete mitogenomes from representatives of the subfamily Smiliogastrinae (Cyprinidae), showed that Caecobarbus was nested within a clade including representatives of the genus Enteromius. The data presented in this study provide information on the molecular identification and classification of this threatened species. The results further suggest the need for a taxonomic revision of the genus Enteromius.
- Subjects :
- Mitochondrial DNA
Subfamily
02 engineering and technology
Biochemistry
03 medical and health sciences
Structural Biology
Genus
Cypriniformes
Cyprinidae
Animals
DNA Barcoding, Taxonomic
Molecular Biology
Phylogeny
030304 developmental biology
0303 health sciences
biology
Phylogenetic tree
High-Throughput Nucleotide Sequencing
Genomics
Sequence Analysis, DNA
General Medicine
021001 nanoscience & nanotechnology
biology.organism_classification
Barb
Caecobarbus geertsii
Evolutionary biology
Genome, Mitochondrial
0210 nano-technology
Subjects
Details
- ISSN :
- 01418130
- Volume :
- 161
- Database :
- OpenAIRE
- Journal :
- International Journal of Biological Macromolecules
- Accession number :
- edsair.doi.dedup.....9bd9c5e585959cdac5ff4de06298aec4
- Full Text :
- https://doi.org/10.1016/j.ijbiomac.2020.05.248