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Nocardioides kongjuensis sp. nov., an N-acylhomoserine lactone-degrading bacterium
- Source :
- International Journal of Systematic and Evolutionary Microbiology. 56:1783-1787
- Publication Year :
- 2006
- Publisher :
- Microbiology Society, 2006.
-
Abstract
- A Gram-positive, rod- or coccoid-shaped andN-hexanoyl-l-homoserine lactone-degrading bacterial strain, A2-4T, was isolated from a soil in Korea, and its taxonomic position was investigated by using a polyphasic approach. Strain A2-4Tgrew optimally at pH 7.0–8.0 and 30 °C without NaCl. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain A2-4Tis most closely related to members of the genusNocardioides. Strain A2-4Tpossessed chemotaxonomic properties indicative of members of the genusNocardioides; the cell-wall peptidoglycan type was based onll-diaminopimelic acid, MK-8(H4) was the predominant menaquinone and iso-C16 : 0was the predominant fatty acid. The DNA G+C content was 72.1 mol%. The 16S rRNA gene sequence of strain A2-4Twas 98.3–99.1 % similar to those of the type strains ofNocardioides simplex,Nocardioides aromaticivoransandNocardioides nitrophenolicusand 93.8–96.3 % similar to those of the type strains of otherNocardioidesspecies. Strain A2-4Tcould be distinguished from the three phylogenetic relatives,N. nitrophenolicus,N. aromaticivoransandN. simplex, by DNA–DNA relatedness (25–42 %) and by differences in some phenotypic characteristics. On the basis of the phenotypic, phylogenetic and genetic data, the strain represents a novel species of the genusNocardioides, for which the nameNocardioides kongjuensissp. nov. is proposed. The type strain is A2-4T(=KCTC 19054T=JCM 12609T).
- Subjects :
- food.ingredient
Molecular Sequence Data
Peptidoglycan
medicine.disease_cause
Microbiology
chemistry.chemical_compound
food
Species Specificity
RNA, Ribosomal, 16S
Sequence Homology, Nucleic Acid
medicine
Nocardioides kongjuensis
Phylogeny
Soil Microbiology
Ecology, Evolution, Behavior and Systematics
Base Composition
Korea
biology
Phylogenetic tree
Nocardioides nitrophenolicus
Fatty Acids
Nocardioides
Vitamin K 2
General Medicine
biology.organism_classification
16S ribosomal RNA
Nocardioides aromaticivorans
Actinobacteria
RNA, Bacterial
chemistry
Actinomycetales
Diaminopimelic acid
Subjects
Details
- ISSN :
- 14665034 and 14665026
- Volume :
- 56
- Database :
- OpenAIRE
- Journal :
- International Journal of Systematic and Evolutionary Microbiology
- Accession number :
- edsair.doi.dedup.....9b36f42b8a143b6386c3d2390bba4d20