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Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation

Authors :
Dawn Field
George M. Garrity
Aaron Gussman
Owen White
Chinnappa D. Kodira
Tatiana Tatusova
Nicholas R. Thomson
Ramana Madupu
Victor Markowitz
William Klimke
Guy Cochrane
Samuel V. Angiuoli
Nikos C. Kyrpides
Source :
OMICS: A Journal of Integrative Biology. 12:137-141
Publication Year :
2008
Publisher :
Mary Ann Liebert Inc, 2008.

Abstract

The methodologies used to generate genome and metagenome annotations are diverse and vary between groups and laboratories. Descriptions of the annotation process are helpful in interpreting genome annotation data. Some groups have produced Standard Operating Procedures (SOPs) that describe the annotation process, but standards are lacking for structure and content of these descriptions. In addition, there is no central repository to store and disseminate procedures and protocols for genome annotation. We highlight the importance of SOPs for genome annotation and endorse an online repository of SOPs.

Details

ISSN :
15578100 and 15362310
Volume :
12
Database :
OpenAIRE
Journal :
OMICS: A Journal of Integrative Biology
Accession number :
edsair.doi.dedup.....9974c3d0bfa3e35dfa5829e5082eeb8c
Full Text :
https://doi.org/10.1089/omi.2008.0017