Additional file 2 of Dissecting indirect genetic effects from peers in laboratory mice

Additional file 2: Supplementary note. Correlation ρ between direct and social genotypes arising from using each individual as both focal individual and social partner. Fig. S1. Estimation of the correlation ρ between IGE and DGE in simulations. Fig. S2. Correlations between direct and social genotypes of CFW mice, and implications for GWAS. Fig. S3. Proportion of phenotypic variance explained by significant DGE and IGE loci. Fig. S4. Power to detect DGE and IGE associations in simulations. Fig. S5. Quantile-quantile (QQ) plot for the igeGWAS P values for Immobility during the first two minutes of the forced swim test. Fig. S6. Information relevant to the role of Dlgap1 in giving rise to IGE on immobility during the last four minutes of the FST. Fig. S7. Phenotypes of the outbred CFW mice used in igeGWAS.