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Nanopore Sequencing at Mars, Europa and Microgravity Conditions
- Source :
- NPJ Microgravity, npj Microgravity, Vol 6, Iss 1, Pp 1-6 (2020)
- Publication Year :
- 2020
- Publisher :
- Cold Spring Harbor Laboratory, 2020.
-
Abstract
- Nanopore sequencing, as represented by Oxford Nanopore Technologies’ MinION, is a promising technology for in situ life detection and for microbial monitoring including in support of human space exploration, due to its small size, low mass (∼100 g) and low power (∼1W). Now ubiquitous on Earth and previously demonstrated on the International Space Station (ISS), nanopore sequencing involves translocation of DNA through a biological nanopore on timescales of milliseconds per base. Nanopore sequencing is now being done in both controlled lab settings as well as in diverse environments that include ground, air and space vehicles. Future space missions may also utilize nanopore sequencing in reduced gravity environments, such as in the search for life on Mars (Earth-relative gravito-inertial acceleration (GIA) g = 0.378), or at icy moons such as Europa (g = 0.134) or Enceladus (g = 0.012). We confirm the ability to sequence at Mars as well as near Europa or Lunar (g = 0.166) and lower g levels, demonstrate the functionality of updated chemistry and sequencing protocols under parabolic flight, and reveal consistent performance across g level, during dynamic accelerations, and despite vibrations with significant power at translocation-relevant frequencies. Our work strengthens the use case for nanopore sequencing in dynamic environments on Earth and in space, including as part of the search for nucleic-acid based life beyond Earth.
- Subjects :
- 0301 basic medicine
Physics and Astronomy (miscellaneous)
lcsh:Biotechnology
Materials Science (miscellaneous)
Medicine (miscellaneous)
Life on Mars
Biochemistry, Genetics and Molecular Biology (miscellaneous)
lcsh:Physiology
Article
Space exploration
Astrobiology
Nanopores
03 medical and health sciences
0302 clinical medicine
lcsh:TP248.13-248.65
International Space Station
lcsh:QP1-981
Mars Exploration Program
Icy moon
Agricultural and Biological Sciences (miscellaneous)
Nanopore
Aerospace engineering
030104 developmental biology
Space and Planetary Science
Minion
Nanopore sequencing
Biological physics
030217 neurology & neurosurgery
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- NPJ Microgravity, npj Microgravity, Vol 6, Iss 1, Pp 1-6 (2020)
- Accession number :
- edsair.doi.dedup.....98db6fca1fb16f690e68947df9a85975