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Mutations Closer to the Active Site Improve the Promiscuous Aldolase Activity of 4-Oxalocrotonate Tautomerase More Effectively than Distant Mutations

Authors :
Bert-Jan Baas
Harshwardhan Poddar
Jan-Ytzen van der Meer
Gerrit J. Poelarends
Edzard M. Geertsema
Mehran Rahimi
Chemical and Pharmaceutical Biology
Biopharmaceuticals, Discovery, Design and Delivery (BDDD)
Medicinal Chemistry and Bioanalysis (MCB)
Source :
ChemBioChem, 17(13), 1225-1228. WILEY-V C H VERLAG GMBH
Publication Year :
2016
Publisher :
Wiley, 2016.

Abstract

The enzyme 4-oxalocrotonate tautomerase (4-OT), which catalyzes enol-keto tautomerization as part of a degradative pathway for aromatic hydrocarbons, promiscuously catalyzes various carbon-carbon bond-forming reactions. These include the aldol condensation of acetaldehyde with benzaldehyde to yield cinnamaldehyde. Here, we demonstrate that 4-OT can be engineered into a more efficient aldolase for this condensation reaction, with a >5000-fold improvement in catalytic efficiency (kcat /Km ) and a >10(7) -fold change in reaction specificity, by exploring small libraries in which only "hotspots" are varied. The hotspots were identified by systematic mutagenesis (covering each residue), followed by a screen for single mutations that give a strong improvement in the desired aldolase activity. All beneficial mutations were near the active site of 4-OT, thus underpinning the notion that new catalytic activities of a promiscuous enzyme are more effectively enhanced by mutations close to the active site.

Details

ISSN :
14394227
Volume :
17
Database :
OpenAIRE
Journal :
ChemBioChem
Accession number :
edsair.doi.dedup.....98b0e3c58a4b628e01e20d45163cd9a2
Full Text :
https://doi.org/10.1002/cbic.201600149