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Reproducibility of telomere length assessment: an international collaborative study
- Source :
- International Journal of Epidemiology, International Journal of Epidemiology, Oxford University Press (OUP), 2015, 44 (5), pp.1673-1683. ⟨10.1093/ije/dyu191⟩, International Journal of Epidemiology, 44(5), 1673-1683. Oxford University Press, INTERNATIONAL JOURNAL OF EPIDEMIOLOGY, International Journal of Epidemiology, Oxford University Press (OUP), 2015, 44 (5), pp.1749-1754. ⟨10.1093/ije/dyv171⟩, International Journal of Epidemiology, 2015, 44 (5), pp.1673-1683. ⟨10.1093/ije/dyu191⟩, International Journal of Epidemiology, 2015, 44 (5), pp.1749-1754. ⟨10.1093/ije/dyv171⟩
- Publication Year :
- 2014
- Publisher :
- Oxford University Press, 2014.
-
Abstract
- Background: Telomere length is a putative biomarker of ageing, morbidity and mortality. Its application is hampered by lack of widely applicable reference ranges and uncertainty regarding the present limits of measurement reproducibility within and between laboratories.\ud \ud Methods: We instigated an international collaborative study of telomere length assessment: 10 different laboratories, employing 3 different techniques [Southern blotting, single telomere length analysis (STELA) and real-time quantitative PCR (qPCR)] performed two rounds of fully blinded measurements on 10 human DNA samples per round to enable unbiased assessment of intra- and inter-batch variation between laboratories and techniques.\ud \ud Results: Absolute results from different laboratories differed widely and could thus not be compared directly, but rankings of relative telomere lengths were highly correlated (correlation coefficients of 0.63–0.99). Intra-technique correlations were similar for Southern blotting and qPCR and were stronger than inter-technique ones. However, inter-laboratory coefficients of variation (CVs) averaged about 10% for Southern blotting and STELA and more than 20% for qPCR. This difference was compensated for by a higher dynamic range for the qPCR method as shown by equal variance after z-scoring. Technical variation per laboratory, measured as median of intra- and inter-batch CVs, ranged from 1.4% to 9.5%, with differences between laboratories only marginally significant (P = 0.06). Gel-based and PCR-based techniques were not different in accuracy.\ud \ud Conclusions: Intra- and inter-laboratory technical variation severely limits the usefulness of data pooling and excludes sharing of reference ranges between laboratories. We propose to establish a common set of physical telomere length standards to improve comparability of telomere length estimates between laboratories.
- Subjects :
- BIOMARKER
Gerontology
Aging
medicine.medical_specialty
FIBROBLASTS
International Cooperation
[SDV]Life Sciences [q-bio]
[SDV.CAN]Life Sciences [q-bio]/Cancer
[SDV.BC]Life Sciences [q-bio]/Cellular Biology
Real-Time Polymerase Chain Reaction
SOUTHERN BLOTS
Epidemiology
medicine
Humans
EPIDEMIOLOGY
[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology
human
ComputingMilieux_MISCELLANEOUS
Reproducibility
business.industry
HUMAN-CELLS
MORTALITY
DEMENTIA
FLOW-CYTOMETRY
Methodology
Reproducibility of Results
Biology and Life Sciences
Public Health, Global Health, Social Medicine and Epidemiology
DNA
General Medicine
ASSOCIATION
Telomere
telomeres
R1
3. Good health
Folkhälsovetenskap, global hälsa, socialmedicin och epidemiologi
Blotting, Southern
Ageing
[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics
CARDIOVASCULAR-DISEASE
biomarker
variation
Corrigendum
business
Biomarkers
Subjects
Details
- Language :
- English
- ISSN :
- 14643685 and 03005771
- Volume :
- 44
- Issue :
- 5
- Database :
- OpenAIRE
- Journal :
- International Journal of Epidemiology
- Accession number :
- edsair.doi.dedup.....97e1d407941b583151ede2d144ea393f
- Full Text :
- https://doi.org/10.1093/ije/dyu191⟩