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Insight into the genome sequence of a sediment-adapted marine bacterium Neptunomonas antarctica S3-22T from Antarctica
- Source :
- Marine Genomics. 25:29-31
- Publication Year :
- 2016
- Publisher :
- Elsevier BV, 2016.
-
Abstract
- Neptunomonas antarctica S3-22(T) was isolated from marine sediment of the Nella Fjord, Antarctica. Here we report the draft genome sequence of N. antarctica, which comprises 4,568,828 bp with a mean G+C content of 45.7%. We found numerous genes related to resistance, motility and chemotaxis, nitrogen metabolism, aromatic compound metabolism and stress response. These metabolic features and related genes revealed genetic basis for the adaptation to the marine sediment environment in Antarctica. The genome sequence of N. antarctica S3-22(T) may also provide further insights into the ecological role of the genus Neptunomonas.
- Subjects :
- Oceanospirillaceae
0301 basic medicine
Geologic Sediments
Neptunomonas antarctica
Fjord
010501 environmental sciences
Aquatic Science
01 natural sciences
03 medical and health sciences
Bacterial Proteins
Genetics
Gene
0105 earth and related environmental sciences
Whole genome sequencing
geography
geography.geographical_feature_category
biology
Ecology
fungi
Sediment
Gene Expression Regulation, Bacterial
biology.organism_classification
Adaptation, Physiological
030104 developmental biology
Adaptation
Genome, Bacterial
Bacteria
Subjects
Details
- ISSN :
- 18747787
- Volume :
- 25
- Database :
- OpenAIRE
- Journal :
- Marine Genomics
- Accession number :
- edsair.doi.dedup.....97a3a938fc809bb174ae221e4bdbf3db