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A massively multi-scale approach to characterising tissue architecture by synchrotron micro-CT applied to the human placenta
- Source :
- Journal of the Royal Society Interface
- Publication Year :
- 2020
- Publisher :
- Cold Spring Harbor Laboratory, 2020.
-
Abstract
- Multi-scale structural assessment of biological soft tissue is challenging but essential to gain insight into structure-function relationships of tissue/organ. Using the human placenta as an example, this study brings together sophisticated sample preparation protocols, advanced imaging, and robust, validated machine-learning segmentation techniques to provide the first massively multi-scale and multi-domain information that enables detailed morphological and functional analyses of both maternal and fetal placental domains. Finally, we quantify the scale-dependent error in morphological metrics of heterogeneous placental tissue, estimating the minimal tissue scale needed in extracting meaningful biological data. The developed protocol is beneficial for high-throughput investigation of structure-function relationships in both normal and diseased placentas, allowing us to optimise therapeutic approaches for pathological pregnancies. In addition, the methodology presented is applicable in characterisation of tissue architecture and physiological behaviours of other complex organs with similarity to the placenta, where an exchange barrier possesses circulating vascular and avascular fluid spaces. Summary Using the human placenta as an example, this study brings together sophisticated sample preparation protocols, advanced 3D X-ray imaging, and robust, validated machine-learning segmentation techniques to provide massively multi-scale and multi-domain insights on vascular-rich organ morphology and function.
- Subjects :
- 0301 basic medicine
flow network
Tissue architecture
Computer science
Placenta
Biomedical Engineering
Biophysics
Bioengineering
02 engineering and technology
Computational biology
Biochemistry
spatial statistics
Biomaterials
machine-learning segmentation
03 medical and health sciences
human placenta
Fetus
Pregnancy
medicine
Humans
Sample preparation
Segmentation
Micro ct
Life Sciences–Engineering interface
Research Articles
Protocol (science)
Biological data
Scale (chemistry)
Placental tissue
Soft tissue
computed tomography
Human placenta
X-Ray Microtomography
contrast agent
021001 nanoscience & nanotechnology
030104 developmental biology
medicine.anatomical_structure
Female
0210 nano-technology
Synchrotrons
Biotechnology
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- Journal of the Royal Society Interface
- Accession number :
- edsair.doi.dedup.....96e556571cf96480c8d40d80d34b4e90
- Full Text :
- https://doi.org/10.1101/2020.12.07.411462