Back to Search
Start Over
Exploring the Novel Susceptibility Gene Variants for Primary Open-Angle Glaucoma in East Asian Cohorts: The GLAU-GENDISK Study
- Source :
- Scientific Reports, Scientific Reports, Vol 10, Iss 1, Pp 1-9 (2020)
- Publication Year :
- 2020
- Publisher :
- Springer Science and Business Media LLC, 2020.
-
Abstract
- Primary open-angle glaucoma (POAG) can develop even within normal ranges of intraocular pressure, and this type of glaucoma (so-called ‘normal-tension glaucoma [NTG]’) is highly prevalent in East Asia including Korea and Japan. We conducted exome chip analysis to identify low-frequency and rare variants associated with POAG from the primary cohort (309 POAG patients and 5,400 control, all Koreans). For replication, Korean (310 POAG patients and 5,612 controls) and Japanese (565 POAG patients and 1,104 controls) cohorts were further investigated by targeted genotyping. SNP rs116121322 in LRRC27 showed nominally significant association with POAG in the discovery cohort (OR = 29.85, P = 2E–06). This SNP was validated in the Korean replication cohort but only in the NTG subgroups (OR = 9.86, P = 0.007). Japanese replication cohort did not show significant association with POAG (P .00.44). However, the meta-analysis in the entire cohort revealed significant association of rs116121322 with POAG (ORcombined = 10.28, Pcombined = 1.4E–07). The LRRC27 protein expression was confirmed from human trabecular meshwork cells. For gene-based testing, METTL20 showed a significant association in POAG (Pcombined = 0.002) and in the subgroup of NTG (Pcombined = 0.02), whereas ZNF677 were significantly associated with only in the subgroup of high-tension glaucoma (Pcombined = 1.5E–06). Our findings may provide further genetic backgrounds into the pathogenesis of POAG, especially for the patients who have lower baseline intraocular pressures.
- Subjects :
- Male
0301 basic medicine
medicine.medical_specialty
Intraocular pressure
Genotype
genetic structures
Open angle glaucoma
lcsh:Medicine
Glaucoma
Polymorphism, Single Nucleotide
Article
03 medical and health sciences
0302 clinical medicine
Ophthalmology
Genetics research
medicine
Humans
SNP
Genetic Predisposition to Disease
Prospective Studies
lcsh:Science
Genotyping
Exome
Multidisciplinary
Asia, Eastern
business.industry
lcsh:R
Nuclear Proteins
Middle Aged
Prognosis
medicine.disease
eye diseases
030104 developmental biology
medicine.anatomical_structure
Case-Control Studies
Cohort
Optic nerve diseases
030221 ophthalmology & optometry
lcsh:Q
Female
sense organs
Trabecular meshwork
business
Biomarkers
Glaucoma, Open-Angle
Follow-Up Studies
Subjects
Details
- ISSN :
- 20452322
- Volume :
- 10
- Database :
- OpenAIRE
- Journal :
- Scientific Reports
- Accession number :
- edsair.doi.dedup.....961922a9abac32d2048a78b9a0b52ca8
- Full Text :
- https://doi.org/10.1038/s41598-019-57066-7