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Circulating neutrophil transcriptome may reveal intracranial aneurysm signature
- Source :
- PLoS ONE, Vol 13, Iss 1, p e0191407 (2018), PLoS ONE
- Publication Year :
- 2018
- Publisher :
- Public Library of Science (PLoS), 2018.
-
Abstract
- Background Unruptured intracranial aneurysms (IAs) are typically asymptomatic and undetected except for incidental discovery on imaging. Blood-based diagnostic biomarkers could lead to improvements in IA management. This exploratory study examined circulating neutrophils to determine whether they carry RNA expression signatures of IAs. Methods Blood samples were collected from patients receiving cerebral angiography. Eleven samples were collected from patients with IAs and 11 from patients without IAs as controls. Samples from the two groups were paired based on demographics and comorbidities. RNA was extracted from isolated neutrophils and subjected to next-generation RNA sequencing to obtain differential expressions for identification of an IA-associated signature. Bioinformatics analyses, including gene set enrichment analysis and Ingenuity Pathway Analysis, were used to investigate the biological function of all differentially expressed transcripts. Results Transcriptome profiling identified 258 differentially expressed transcripts in patients with and without IAs. Expression differences were consistent with peripheral neutrophil activation. An IA-associated RNA expression signature was identified in 82 transcripts (p
- Subjects :
- 0301 basic medicine
Male
Pathology
Neutrophils
Molecular biology
Gene Expression
lcsh:Medicine
Cardiovascular Medicine
Aneurysm, Ruptured
Pathology and Laboratory Medicine
Vascular Medicine
Diagnostic Radiology
Transcriptome
Cohort Studies
White Blood Cells
0302 clinical medicine
Sequencing techniques
Animal Cells
Risk Factors
Gene expression
Medicine and Health Sciences
Cardiovascular Imaging
lcsh:Science
Immune Response
Aged, 80 and over
Multidisciplinary
Radiology and Imaging
Angiography
RNA sequencing
Genomics
Middle Aged
3. Good health
Female
medicine.symptom
Cellular Types
Aneurysms
Transcriptome Analysis
Research Article
medicine.medical_specialty
Imaging Techniques
Immune Cells
Immunology
Inflammation
Asymptomatic
03 medical and health sciences
Text mining
Signs and Symptoms
Diagnostic Medicine
medicine
Genetics
Humans
Vascular Diseases
Gene
Aged
Blood Cells
business.industry
Gene Expression Profiling
lcsh:R
RNA
Biology and Life Sciences
Computational Biology
Intracranial Aneurysm
Cell Biology
Genome Analysis
Cerebral Angiography
Gene expression profiling
Research and analysis methods
030104 developmental biology
Molecular biology techniques
lcsh:Q
business
030217 neurology & neurosurgery
Biomarkers
Subjects
Details
- Language :
- English
- ISSN :
- 19326203
- Volume :
- 13
- Issue :
- 1
- Database :
- OpenAIRE
- Journal :
- PLoS ONE
- Accession number :
- edsair.doi.dedup.....9504c54c4108c02b849d4d1bfde3e858