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Shieldin complex promotes DNA end-joining and counters homologous recombination in BRCA1-null cells

Authors :
Stephen P. Jackson
Mareike Herzog
Alejandra Bruna
Luca Pellegrini
Violeta Serra
Mark J. O'Connor
Zhongwu Lai
Chloé Lescale
Jacqueline J.L. Jacobs
Fengtang Yang
Jonathan Lam
Matylda Sczaniecka-Clift
Abigail Shea
Carlos Caldas
Matthias Ostermaier
Gabriel Balmus
Julia Coates
Wenming Wei
Inge de Krijger
Yaron Galanty
Mukerrem Demir
Ludovic Deriano
Petra Beli
Domenic Pilger
Harveer Dev
Rimma Belotserkovskaya
Alistair Martin
Beiyuan Fu
Ting-Wei Will Chiang
Qian Wu
Dev, Harveer [0000-0003-2874-6894]
Yang, Fengtang [0000-0002-3573-2354]
Balmus, Gabriel [0000-0003-2872-4468]
Serra, Violeta [0000-0001-6620-1065]
Beli, Petra [0000-0001-9507-9820]
Pellegrini, Luca [0000-0002-9300-497X]
Deriano, Ludovic [0000-0002-9673-9525]
Jacobs, Jacqueline JL [0000-0002-7704-4795]
Jackson, Stephen P [0000-0001-9317-7937]
Apollo - University of Cambridge Repository
Wellcome Trust/Cancer Research UK Gurdon Institute
University of Cambridge [UK] (CAM)
Department of Biochemistry [Cambridge]
Cambridge University Hospitals - NHS (CUH)
Intégrité du génome, immunité et cancer - Genome integrity, Immunity and Cancer
Institut Pasteur [Paris] (IP)
Netherlands Cancer Institute (NKI)
Antoni van Leeuwenhoek Hospital
Cancer Research UK Cambridge Institute [Cambridge, Royaume-Uni] (CRUK)
Institute of Molecular Biology (IMB)
Johannes Gutenberg - Universität Mainz = Johannes Gutenberg University (JGU)
Wellcome Trust Sanger Institute [Hinxton, UK]
AstraZeneca US [Waltham, USA]
AstraZeneca [Cambridge, UK]
The Wellcome Trust Sanger Institute [Cambridge]
Vall d'Hebron Institute of Oncology [Barcelone] (VHIO)
Vall d'Hebron University Hospital [Barcelona]
The SPJ lab is largely funded by a Cancer Research UK (CRUK) Program Grant, C6/A18796, and a Wellcome Trust (WT) Investigator Award, 206388/Z/17/Z. Core infrastructure funding was provided by CRUK grant C6946/A24843 and WT grant WT203144. S.P.J. receives a salary from the University of Cambridge. H.D. is funded by WT Clinical Fellowship 206721/Z/17/Z. TWC was supported by a Cambridge International Scholarship. D.P. is funded by Cancer Research UK studentship C6/A21454. The P.B. lab is supported by the Emmy Noether Program (BE 5342/1-1) from the German Research Foundation and a Marie Curie Career Integration Grant from the European Commission (630763). The L.P. lab is funded by the WT (investigator award 104641/Z/14/Z) and the Medical Research Council (project grant MR/N000161/1). The C.C. lab was supported with funding from CRUK. The J.J. lab was supported by the European Research Council grant ERC-StG 311565, The Dutch Cancer Society (KWF) grant KWF 10999, and the Netherlands Organization for Scientific Research (NWO) as part of the National Roadmap Large-scale Research Facilities of the Netherlands, Proteins@Work (project no. 184.032.201 to the Proteomics Facility of the Netherlands Cancer Institute). The L.D. lab is funded by the Institut Pasteur, the Institut National du Cancer (no. PLBIO16-181) and the European Research Council (starting grant agreement no. 310917). W.W. is part of the Pasteur–Paris University (PPU) International PhD program and this project received funding from the CNBG company, China. Q.W. is funded by the Wellcome Trust (200814/Z/16/Z ). The V.S. lab work was funded by the Instituto de Salud Carlos III (ISCIII), an initiative of the Spanish Ministry of Economy and Innovation partially supported by European Regional Development FEDER Funds (PI17-01080 to VS), the European Research Area-NET, Transcan-2 (AC15/00063), a non-commercial research agreement with AstraZeneca UK, and structural funds from the Agència de Gestió d’Ajuts Universitaris i de Recerca (AGAUR, 2017 SGR 540) and the Orozco Family. V.S. received a salary and travel support to C.C.’s lab from ISCIII (CP14/00228, MV15/00041) and the FERO Foundation.
The authors thank all S.P.J. laboratory members for support and advice, and Cambridge colleagues N. Lawrence for OMX super-resolution microscopy support and R. Butler for help with computational image analyses and programming. The authors also thank S. Selivanova and S. Hough for help with plasmid amplification, sample preparation and tissue culture maintenance, K. Dry for extensive editorial assistance, F. Muñoz-Martinez for assistance with CRISPR–Cas9 knockout generation, L. Radu for assistance with protein purification, C. Lord (Institute of Cancer Research, London) for SUM149PT cells, D. Durocher (University of Toronto, Canada) for U2OS LacSceIII cells, F. Alt (Harvard University, USA) for CH12F3 cells and 53bp1 knockout CH12F3 cell clones, T. Honjo (Kyoto University, Japan) for permission to use the CH12F3 cell line, and J. Serrat in the Jacobs lab for technical assistance
Institut Pasteur [Paris]
Johannes Gutenberg - Universität Mainz (JGU)
Source :
Nature Cell Biology, Nature Cell Biology, 2018, 20 (8), pp.954-965. ⟨10.1038/s41556-018-0140-1⟩, Nature cell biology, Nature Cell Biology, Nature Publishing Group, 2018, 20 (8), pp.954-965. ⟨10.1038/s41556-018-0140-1⟩
Publication Year :
2018
Publisher :
Springer Science and Business Media LLC, 2018.

Abstract

International audience; BRCA1 deficiencies cause breast, ovarian, prostate and other cancers, and render tumours hypersensitive to poly(ADP-ribose) polymerase (PARP) inhibitors. To understand the resistance mechanisms, we conducted whole-genome CRISPR-Cas9 synthetic-viability/resistance screens in BRCA1-deficient breast cancer cells treated with PARP inhibitors. We identified two previously uncharacterized proteins, C20orf196 and FAM35A, whose inactivation confers strong PARP-inhibitor resistance. Mechanistically, we show that C20orf196 and FAM35A form a complex, 'Shieldin' (SHLD1/2), with FAM35A interacting with single-stranded DNA through its C-terminal oligonucleotide/oligosaccharide-binding fold region. We establish that Shieldin acts as the downstream effector of 53BP1/RIF1/MAD2L2 to promote DNA double-strand break (DSB) end-joining by restricting DSB resection and to counteract homologous recombination by antagonizing BRCA2/RAD51 loading in BRCA1-deficient cells. Notably, Shieldin inactivation further sensitizes BRCA1-deficient cells to cisplatin, suggesting how defining the SHLD1/2 status of BRCA1-deficient tumours might aid patient stratification and yield new treatment opportunities. Highlighting this potential, we document reduced SHLD1/2 expression in human breast cancers displaying intrinsic or acquired PARP-inhibitor resistance.

Subjects

Subjects :
MESH: DNA Breaks, Double-Stranded
RAD51
Cell Cycle Proteins
Poly (ADP-Ribose) Polymerase Inhibitor
MESH: Recombinational DNA Repair
Mice
MESH: Animals
DNA Breaks, Double-Stranded
skin and connective tissue diseases
Cancer
Telomere-binding protein
Ovarian Neoplasms
MESH: Breast Neoplasms / metabolism
MESH: Telomere-Binding Proteins / metabolism
3. Good health
Cell biology
MESH: HEK293 Cells
MESH: Proteins / genetics
MESH: Telomere-Binding Proteins / genetics
MESH: Tumor Suppressor p53-Binding Protein 1 / metabolism
MESH: Xenograft Model Antitumor Assays
Telomere-Binding Proteins
MESH: Ovarian Neoplasms / drug therapy
Bone Neoplasms
MESH: Ovarian Neoplasms / metabolism
Article
03 medical and health sciences
MESH: Cell Cycle Proteins
MESH: Bone Neoplasms / metabolism
Humans
MESH: Osteosarcoma / metabolism
[SDV.GEN]Life Sciences [q-bio]/Genetics
MESH: Humans
MESH: Tumor Suppressor p53-Binding Protein 1 / genetics
Dose-Response Relationship, Drug
HEK 293 cells
Proteins
[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology
DNA
MESH: BRCA1 Protein / deficiency
030104 developmental biology
Multiprotein Complexes
MESH: Mad2 Proteins / metabolism
MESH: Breast Neoplasms / genetics
MESH: Bone Neoplasms / drug therapy
Cisplatin
Homologous recombination
MESH: Osteosarcoma / genetics
MESH: Female
0301 basic medicine
DNA End-Joining Repair
MESH: Proteins / metabolism
MESH: Dose-Response Relationship, Drug
chemistry.chemical_compound
MESH: Osteosarcoma / pathology
MESH: Breast Neoplasms / pathology
Homologous Recombination
Polymerase
MESH: Breast Neoplasms / drug therapy
Osteosarcoma
biology
Chemistry
BRCA1 Protein
DNA damage and repair
MESH: Poly(ADP-ribose) Polymerase Inhibitors / pharmacology
MESH: Bone Neoplasms / genetics
DNA-Binding Proteins
MESH: Bone Neoplasms / pathology
Mad2 Proteins
Female
MESH: Ovarian Neoplasms / genetics
Tumor Suppressor p53-Binding Protein 1
MESH: Cisplatin / pharmacology
MESH: Cell Line, Tumor
Lymphocytes, Null
[SDV.CAN]Life Sciences [q-bio]/Cancer
Breast Neoplasms
[SDV.BC]Life Sciences [q-bio]/Cellular Biology
MESH: BRCA1 Protein / genetics
Poly(ADP-ribose) Polymerase Inhibitors
Cell Line, Tumor
MESH: Drug Resistance, Neoplasm* / genetics
MESH: Mad2 Proteins / genetics
MESH: Ovarian Neoplasms / pathology
Animals
MESH: Mice
MESH: Osteosarcoma / drug therapy
Oligonucleotide
Protective Devices
Recombinational DNA Repair
Cell Biology
MESH: Multiprotein Complexes
Xenograft Model Antitumor Assays
HEK293 Cells
Drug Resistance, Neoplasm
biology.protein
MESH: DNA End-Joining Repair
MESH: DNA-Binding Proteins

Details

ISSN :
14657392 and 14764679
Database :
OpenAIRE
Journal :
Nature Cell Biology, Nature Cell Biology, 2018, 20 (8), pp.954-965. ⟨10.1038/s41556-018-0140-1⟩, Nature cell biology, Nature Cell Biology, Nature Publishing Group, 2018, 20 (8), pp.954-965. ⟨10.1038/s41556-018-0140-1⟩
Accession number :
edsair.doi.dedup.....94c03882fb1aad0056e71d15c34e8ed4