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pymzML--Python module for high-throughput bioinformatics on mass spectrometry data

Authors :
Michael Specht
Johannes Barth
Christian Fufezan
Anna Niehues
Michael Hippler
Till Bald
Source :
Bioinformatics (Oxford, England). 28(7)
Publication Year :
2012

Abstract

Summary: pymzML is an extension to Python that offers (i) an easy access to mass spectrometry (MS) data that allows the rapid development of tools, (ii) a very fast parser for mzML data, the standard data format in MS and (iii) a set of functions to compare or handle spectra. Availability and implementation: pymzML requires Python2.6.5+ and is fully compatible with Python3. The module is freely available on http://pymzml.github.com or pypi, is published under LGPL license and requires no additional modules to be installed. Contact: christian@fufezan.net

Details

ISSN :
13674811
Volume :
28
Issue :
7
Database :
OpenAIRE
Journal :
Bioinformatics (Oxford, England)
Accession number :
edsair.doi.dedup.....93c05915ed5c5cf8e6abc282a6c955ac