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The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources
- Source :
- Nucleic Acids Research
- Publication Year :
- 2018
- Publisher :
- Oxford University Press, 2018.
-
Abstract
- The Zebrafish Information Network (ZFIN) (https://zfin.org/) is the database for the model organism, zebrafish (Danio rerio). ZFIN expertly curates, organizes and provides a wide array of zebrafish genetic and genomic data, including genes, alleles, transgenic lines, gene expression, gene function, mutant phenotypes, orthology, human disease models, nomenclature and reagents. New features at ZFIN include increased support for genomic regions and for non-coding genes, and support for more expressive Gene Ontology annotations. ZFIN has recently taken over maintenance of the zebrafish reference genome sequence as part of the Genome Reference Consortium. ZFIN is also a founding member of the Alliance of Genome Resources, a collaboration of six model organism databases (MODs) and the Gene Ontology Consortium (GO). The recently launched Alliance portal (https://alliancegenome.org) provides a unified, comparative view of MOD, GO, and human data, and facilitates foundational and translational biomedical research.
- Subjects :
- animal structures
ved/biology.organism_classification_rank.species
Mutant
Gene Expression
Computational biology
Biology
Genome
03 medical and health sciences
0302 clinical medicine
Databases, Genetic
Genetics
Database Issue
Animals
Humans
Model organism
Genome Reference Consortium
Gene
Zebrafish
030304 developmental biology
0303 health sciences
ved/biology
Molecular Sequence Annotation
Genomics
biology.organism_classification
Phenotype
Gene Ontology
Mutation
Zebrafish Information Network genome database
030217 neurology & neurosurgery
Subjects
Details
- Language :
- English
- ISSN :
- 13624962 and 03051048
- Volume :
- 47
- Database :
- OpenAIRE
- Journal :
- Nucleic Acids Research
- Accession number :
- edsair.doi.dedup.....9369713b13eff82a6db7fa23b2eb3566