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Evidence for Modulation of Oxygen-Rebound Rate in Control of Outcome by Iron(II)- and 2-Oxoglutarate-Dependent Oxygenases
- Publication Year :
- 2019
-
Abstract
- Iron(II)- and 2-oxoglutarate-dependent (Fe/2OG) oxygenases generate iron(IV)-oxo (ferryl) intermediates that can abstract hydrogen from aliphatic carbons (R–H). Hydroxylation proceeds by coupling of the resultant substrate radical (R•) and oxygen of the Fe(III)–OH complex (“oxygen rebound”). Non-hydroxylation outcomes result from different fates of the Fe(III)–OH/R• state; for example, halogenation results from R• coupling to a halogen ligand cis to the hydroxide. We previously suggested that halogenases control substrate-cofactor disposition to disfavor oxygen rebound and permit halogen coupling to prevail. Here, we explored the general implication that, when a ferryl intermediate can ambiguously target two substrate carbons for different outcomes, rebound to the site capable of the alternative outcome should be slower than to the adjacent, solely hydroxylated site. We evaluated this prediction for (i) the halogenase SyrB2, which exclusively hydroxylates C5 of norvaline appended to its carrier protein but can either chlorinate or hydroxylate C4 and (ii) two bifunctional enzymes that normally hydroxylate one carbon before coupling that oxygen to a second carbon (producing an oxacycle) but can, upon encountering deuterium at the first site, hydroxylate the second site instead. In all three cases, substrate hydroxylation incorporates a greater fraction of solvent-derived oxygen at the site that can also undergo the alternative outcome than at the other site, most likely reflecting increased exchange of the initially O(2)-derived oxygen ligand in the longer-lived Fe(III)–OH/R• states. Suppression of rebound may thus be generally important for non-hydroxylation outcomes by these enzymes.
- Subjects :
- Oxygenase
Stereochemistry
chemistry.chemical_element
010402 general chemistry
01 natural sciences
Biochemistry
Oxygen
Catalysis
Article
Hydroxylation
chemistry.chemical_compound
Colloid and Surface Chemistry
Ferrous Compounds
Bifunctional
Molecular Structure
Substrate (chemistry)
Halogenation
Stereoisomerism
General Chemistry
Ligand (biochemistry)
0104 chemical sciences
chemistry
Oxygenases
Ketoglutaric Acids
Norvaline
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....934c1d1967ba3623575839026207dd04