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Molecular identification and echinocandin susceptibility of candida parapsilosis complex bloodstream isolates in Italy, 2007-2014
- Source :
- PLoS ONE, PLoS ONE, Vol 11, Iss 2, p e0150218 (2016)
- Publication Year :
- 2016
- Publisher :
- Public Library of Science, 2016.
-
Abstract
- The Candida parapsilosis group encompasses three species: C. parapsilosis, C. orthopsilosis, and C. metapsilosis. Here, we describe the incidence and echinocandin susceptibility profile of bloodstream isolates of these three species collected from patients admitted to an Italian university hospital from 2007 to 2014. Molecular identification of cryptic species of the C. parapsilosis complex was performed using polymerase chain reaction amplification of the gene encoding secondary alcohol dehydrogenase, followed by digestion with the restriction enzyme BanI. Minimum inhibitory concentrations were determined using the broth microdilution method according to European Committee for Antimicrobial Susceptibility Testing (EUCAST EDef 7.2) and Clinical Laboratory Standards Institute (CLSI M27-A3) guidelines, and the results were compared with those obtained using the E-test and Sensititre methods. Of the 163 C. parapsilosis complex isolates, 136 (83.4%) were identified as C. parapsilosis, and 27 (16.6%) as C. orthopsilosis. The species-specific incidences were 2.9/10,000 admissions for C. parapsilosis and 0.6/10,000 admissions for C. orthopsilosis. No resistance to echinocandins was detected with any of the methods. The percent essential agreement (EA) between the EUCAST and E-test/Sensititre methods for anidulafungin, caspofungin, and micafungin susceptibility was, respectively, as follows: C. parapsilosis, 95.6/97.8, 98.5/88.2, and 93.4/96.3; C. orthopsilosis, 92.6/92.6, 96.3/77.8, and 63.0/66.7. The EA between the CLSI and E-test/Sensititre methods was, respectively, as follows: C. parapsilosis, 99.3/100, 98.5/89.0, and 96.3/98.5; C. orthopsilosis, 96.3/92.6, 100/81.5, and 92.6/88.9. Only minor discrepancies, ranging from 16.9% (C. parapsilosis) to 11.1% (C. orthopsilosis), were observed between the CLSI and E-test/Sensititre methods. In conclusion, this epidemiologic study shows a typical C. parapsilosis complex species distribution, no echinocandin resistance, and it reinforces the relevance of using commercially available microbiological methods to assess antifungal susceptibility. These data improve our knowledge of the national distribution of species of the psilosis group, as there are very few studies of these species in Italy.
- Subjects :
- 0301 basic medicine
Antifungal Agents
lcsh:Medicine
Fungal Protein
Yeast and Fungal Models
Artificial Gene Amplification and Extension
Pathology and Laboratory Medicine
Candida parapsilosis
Pediatrics
Polymerase Chain Reaction
Geographical Locations
Hospitals, University
Echinocandins
chemistry.chemical_compound
Medicine and Health Sciences
Antifungal Agent
Prospective Studies
lcsh:Science
Deoxyribonucleases, Type II Site-Specific
Candida
Fungal Pathogens
Fungal protein
Cross Infection
Multidisciplinary
biology
Antimicrobials
Microbial Sensitivity Test
Broth microdilution
Drugs
Hospitals
Europe
Intensive Care Units
Italy
Medical Microbiology
Pathogens
Pediatric Infections
Polymorphism, Restriction Fragment Length
Research Article
medicine.drug
Human
Echinocandin
030106 microbiology
Genes, Fungal
Mycology
Microbial Sensitivity Tests
Research and Analysis Methods
Microbiology
Antibiotic Susceptibility Testing
Alcohol Oxidoreductase
Fungal Proteins
03 medical and health sciences
Model Organisms
Species Specificity
Microbial Control
parasitic diseases
medicine
Candida Albicans
Humans
Molecular Biology Techniques
Microbial Pathogens
Molecular Biology
Etest
Pharmacology
Antifungals
lcsh:R
Organisms
Fungi
Micafungin
Biology and Life Sciences
Candidemia
bacterial infections and mycoses
biology.organism_classification
Yeast
Health Care
Alcohol Oxidoreductases
Prospective Studie
Pharmacologic Analysis
chemistry
Health Care Facilities
People and Places
Anidulafungin
lcsh:Q
Caspofungin
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Journal :
- PLoS ONE, PLoS ONE, Vol 11, Iss 2, p e0150218 (2016)
- Accession number :
- edsair.doi.dedup.....9323b0aa8672e5f7fbc214b1dcf8a9e5