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The Crystal Structure of UehA in Complex with Ectoine—A Comparison with Other TRAP-T Binding Proteins
- Source :
- Journal of Molecular Biology. 389:58-73
- Publication Year :
- 2009
- Publisher :
- Elsevier BV, 2009.
-
Abstract
- Substrate-binding proteins or extracellular solute receptors (ESRs) are components of both ABC (ATP binding cassette) and TRAP-T (tripartite ATP-independent periplasmic transporter). The TRAP-T system UehABC from Silicibacter pomeroyi DSS-3 imports the compatible solutes ectoine and 5-hydroxyectoine as nutrients. UehA, the ESR of the UehABC operon, binds both ectoine and 5-hydroxyectoine with high affinity (K(d) values of 1.4+/-0.1 and 1.1+/-0.1 microM, respectively) and delivers them to the TRAP-T complex. The crystal structure of UehA in complex with ectoine was determined at 2.9-A resolution and revealed an overall fold common for all ESR proteins from TRAP systems determined so far. A comparison of the recently described structure of TeaA from Halomonas elongata and an ectoine-binding protein (EhuB) from an ABC transporter revealed a conserved ligand binding mode that involves both directed and cation-pi interactions. Furthermore, a comparison with other known TRAP-T ESRs revealed a helix that might act as a selectivity filter imposing restraints on the ESRs that fine-tune ligand recognition and binding and finally might determine the selection of the cognate substrate.
- Subjects :
- Models, Molecular
Stereochemistry
ATP-binding cassette transporter
Plasma protein binding
Ectoine
Crystallography, X-Ray
Ligands
Protein Structure, Secondary
Substrate Specificity
chemistry.chemical_compound
Protein structure
Bacterial Proteins
Structural Biology
Rhodobacteraceae
Binding site
Molecular Biology
Silicibacter pomeroyi
Binding Sites
biology
Amino Acids, Diamino
Biological Transport
biology.organism_classification
Ligand (biochemistry)
Kinetics
Biochemistry
chemistry
Periplasmic Binding Proteins
Halomonas
Genome, Bacterial
Protein Binding
Subjects
Details
- ISSN :
- 00222836
- Volume :
- 389
- Database :
- OpenAIRE
- Journal :
- Journal of Molecular Biology
- Accession number :
- edsair.doi.dedup.....90418e5aaafe4f6c1cf598ce569bf955
- Full Text :
- https://doi.org/10.1016/j.jmb.2009.03.077