Back to Search
Start Over
Identification of a PLCE1-regulated competing endogenous RNA regulatory network for esophageal squamous cell carcinoma
- Source :
- Oncology Reports
- Publication Year :
- 2021
- Publisher :
- D.A. Spandidos, 2021.
-
Abstract
- Phospholipase C epsilon 1 (PLCE1) and the competing endogenous RNA (ceRNA) network are crucial for tumorigenesis and the progression of esophageal squamous cell carcinoma (ESCC). However, whether PLCE1 can regulate the ceRNA network in ESCC has not been clarified. In the present study, we aimed to identify the PLCE1‑regulated ceRNA network and further elucidate the regulatory mechanisms by which ESCC is promoted. Microarray analysis was used to identify differentially expressed lncRNAs (DELs) and differentially expressed genes (DEGs) from three pairs of samples of PLCE‑silenced Eca109 and control Eca109 cells. Next, the ceRNA regulatory network was established and visualized in Cytoscape, and functional enrichment analysis was performed to analyze DEGs from ceRNAs. Protein‑protein interaction (PPI) networks among the DEGs were established by the STRING database to screen hub genes. Kaplan‑Meier survival analysis was used to validate hub genes. Finally, PLCE1‑related hub gene/lncRNA/miRNA axes were also constructed based on the ceRNA network. A total of 105 DELs and 346 DEGs were found to be dysregulated in the microarray data (|log2FC| >1.5, adjusted P
- Subjects :
- 0301 basic medicine
Cancer Research
Microarray
Esophageal Neoplasms
Apoptosis
Computational biology
03 medical and health sciences
0302 clinical medicine
Phosphoinositide Phospholipase C
PLCE1
Cyclin-dependent kinase
phospholipase C epsilon 1
Cell Line, Tumor
microRNA
Biomarkers, Tumor
Humans
competing endogenous RNA
Gene Regulatory Networks
Protein Interaction Maps
RNA, Messenger
Gene
Endoplasmic Reticulum Chaperone BiP
Cell Proliferation
biology
Microarray analysis techniques
Competing endogenous RNA
biomarkers
General Medicine
Articles
Cell cycle
Prognosis
Survival Analysis
esophageal squamous cell carcinoma
Gene Expression Regulation, Neoplastic
MicroRNAs
030104 developmental biology
Oncology
030220 oncology & carcinogenesis
biology.protein
RNA, Long Noncoding
microarray
Subjects
Details
- Language :
- English
- ISSN :
- 17912431 and 1021335X
- Volume :
- 45
- Issue :
- 3
- Database :
- OpenAIRE
- Journal :
- Oncology Reports
- Accession number :
- edsair.doi.dedup.....8d73274dd9ad30ad4d7f5795a28f86f6