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Identification of a PLCE1-regulated competing endogenous RNA regulatory network for esophageal squamous cell carcinoma

Authors :
Hao Peng
Yi Hui
Feng Li
Menglu Li
Hongpan Zhang
Xiaobin Cui
Lingxie Song
Zhihao Yang
Source :
Oncology Reports
Publication Year :
2021
Publisher :
D.A. Spandidos, 2021.

Abstract

Phospholipase C epsilon 1 (PLCE1) and the competing endogenous RNA (ceRNA) network are crucial for tumorigenesis and the progression of esophageal squamous cell carcinoma (ESCC). However, whether PLCE1 can regulate the ceRNA network in ESCC has not been clarified. In the present study, we aimed to identify the PLCE1‑regulated ceRNA network and further elucidate the regulatory mechanisms by which ESCC is promoted. Microarray analysis was used to identify differentially expressed lncRNAs (DELs) and differentially expressed genes (DEGs) from three pairs of samples of PLCE‑silenced Eca109 and control Eca109 cells. Next, the ceRNA regulatory network was established and visualized in Cytoscape, and functional enrichment analysis was performed to analyze DEGs from ceRNAs. Protein‑protein interaction (PPI) networks among the DEGs were established by the STRING database to screen hub genes. Kaplan‑Meier survival analysis was used to validate hub genes. Finally, PLCE1‑related hub gene/lncRNA/miRNA axes were also constructed based on the ceRNA network. A total of 105 DELs and 346 DEGs were found to be dysregulated in the microarray data (|log2FC| >1.5, adjusted P

Details

Language :
English
ISSN :
17912431 and 1021335X
Volume :
45
Issue :
3
Database :
OpenAIRE
Journal :
Oncology Reports
Accession number :
edsair.doi.dedup.....8d73274dd9ad30ad4d7f5795a28f86f6