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The impact of structural genomics: the first quindecennial
- Source :
- Journal of Structural and Functional Genomics. 17:1-16
- Publication Year :
- 2016
- Publisher :
- Springer Science and Business Media LLC, 2016.
-
Abstract
- The period 2000–2015 brought the advent of high-throughput approaches to protein structure determination. With the overall funding on the order of $2 billion (in 2010 dollars), the structural genomics (SG) consortia established worldwide have developed pipelines for target selection, protein production, sample preparation, crystallization, and structure determination by X-ray crystallography and NMR. These efforts resulted in the determination of over 13,500 protein structures, mostly from unique protein families, and increased the structural coverage of the expanding protein universe. SG programs contributed over 4,400 publications to the scientific literature. The NIH-funded Protein Structure Initiatives (PSI) alone have produced over 2,000 scientific publications, which to date have attracted more than 93,000 citations. Software and database developments that were necessary to handle high-throughput structure determination workflows have led to structures of better quality and improved integrity of the associated data. Organized and accessible data have a positive impact on the reproducibility of scientific experiments. Most of the experimental data generated by the SG centers are freely available to the community and has been utilized by scientists in various fields of research. SG projects have created, improved, streamlined, and validated many protocols for protein production and crystallization, data collection, and functional analysis, significantly benefiting biological and biomedical research.
- Subjects :
- Proteomics
0301 basic medicine
Biomedical Research
Magnetic Resonance Spectroscopy
Protein Conformation
Nanotechnology
Genomics
Scientific experiment
Scientific literature
Biology
Crystallography, X-Ray
Biochemistry
Article
Structural genomics
03 medical and health sciences
Structural Biology
Genetics
Humans
Databases, Protein
Data collection
Computational Biology
Proteins
General Medicine
Data science
030104 developmental biology
Workflow
Subjects
Details
- ISSN :
- 15700267 and 1345711X
- Volume :
- 17
- Database :
- OpenAIRE
- Journal :
- Journal of Structural and Functional Genomics
- Accession number :
- edsair.doi.dedup.....8c318ef1ffd6fe78069f3e4f41501e81
- Full Text :
- https://doi.org/10.1007/s10969-016-9201-5