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Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data
- Source :
- Bioinformatics
- Publication Year :
- 2012
- Publisher :
- Oxford University Press (OUP), 2012.
-
Abstract
- Motivation: High-throughput sequencing (HTS) technologies have made low-cost sequencing of large numbers of samples commonplace. An explosion in the type, not just number, of sequencing experiments has also taken place including genome re-sequencing, population-scale variation detection, whole transcriptome sequencing and genome-wide analysis of protein-bound nucleic acids. Results: We present Artemis as a tool for integrated visualization and computational analysis of different types of HTS datasets in the context of a reference genome and its corresponding annotation. Availability: Artemis is freely available (under a GPL licence) for download (for MacOSX, UNIX and Windows) at the Wellcome Trust Sanger Institute websites: http://www.sanger.ac.uk/resources/software/artemis/. Contact: artemis@sanger.ac.uk; tjc@sanger.ac.uk
- Subjects :
- Statistics and Probability
Context (language use)
Biology
computer.software_genre
Biochemistry
Genome
World Wide Web
03 medical and health sciences
Annotation
Software
Molecular Biology
030304 developmental biology
Unix
0303 health sciences
030306 microbiology
business.industry
High-Throughput Nucleotide Sequencing
Molecular Sequence Annotation
Genome Analysis
Original Papers
Computer Science Applications
Visualization
Computational Mathematics
Computational Theory and Mathematics
Operating system
business
Transcriptome
computer
Reference genome
Subjects
Details
- Database :
- OpenAIRE
- Journal :
- Bioinformatics
- Accession number :
- edsair.doi.dedup.....8bf77266defb82af095c41ed7f13a43b