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Structure of ribose 5-phosphate isomerase from the probiotic bacterium Lactobacillus salivarius UCC118
- Publication Year :
- 2012
- Publisher :
- International Union of Crystallography, 2012.
-
Abstract
- The structure of ribose 5-phosphate isomerase from the probiotic bacterium Lactobacillus salivarius UCC188 has been determined at 1.72 A resolution. The structure was solved by molecular replacement, which identified the functional homodimer in the asymmetric unit. Despite only showing 57% sequence identity to its closest homologue, the structure adopted the typical and β d - ribose 5 - phosphate isomerase fold. Comparison to other related structures revealed high homology in the active site, allowing a model of the substrate-bound protein to be proposed. The determination of the structure was expedited by the use of in situ crystallization-plate screening on beamline I04-1 at Diamond Light Source to identify well diffracting protein crystals prior to routine cryocrystallography. © 2012. © 2012 International Union of Crystallography All rights reserved.
- Subjects :
- Protein Folding
Protein Conformation
Molecular Sequence Data
Biophysics
Isomerase
Crystallography, X-Ray
Biochemistry
chemistry.chemical_compound
Structural Biology
Ribose
Genetics
Structural Communications
Molecular replacement
Amino Acid Sequence
Aldose-Ketose Isomerases
Binding Sites
biology
Lactobacillus salivarius
Active site
Condensed Matter Physics
biology.organism_classification
Phosphate
Lactobacillus
Ribose-5-phosphate isomerase
chemistry
biology.protein
Protein crystallization
Dimerization
Sequence Alignment
Subjects
Details
- Language :
- English
- Database :
- OpenAIRE
- Accession number :
- edsair.doi.dedup.....8addf3c5c676a1ce444c4042ee2d0cd7