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RNA velocity-current challenges and future perspectives

Authors :
Ruslan A. Soldatov
Volker Bergen
Fabian J. Theis
Peter V. Kharchenko
Source :
Mol. Syst. Biol. 17:e10282 (2021), Molecular Systems Biology, Molecular Systems Biology, Vol 17, Iss 8, Pp n/a-n/a (2021)
Publication Year :
2021
Publisher :
Wiley, 2021.

Abstract

RNA velocity has enabled the recovery of directed dynamic information from singleā€cell transcriptomics by connecting measurements to the underlying kinetics of gene expression. This approach has opened up new ways of studying cellular dynamics. Here, we review the current state of RNA velocity modeling approaches, discuss various examples illustrating limitations and potential pitfalls, and provide guidance on how the ensuing challenges may be addressed. We then outline future directions on how to generalize the concept of RNA velocity to a wider variety of biological systems and modalities.<br />This Review discusses the emerging challenges and potential pitfalls of current RNA velocity modeling approaches and provides guidance on how to address them.

Details

Language :
English
Database :
OpenAIRE
Journal :
Mol. Syst. Biol. 17:e10282 (2021), Molecular Systems Biology, Molecular Systems Biology, Vol 17, Iss 8, Pp n/a-n/a (2021)
Accession number :
edsair.doi.dedup.....880adb3f43330725477d193a735d89a6