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Direct colorimetric LAMP assay for rapid detection of African swine fever virus: A validation study during an outbreak in Vietnam
- Source :
- Transboundary and emerging diseasesREFERENCES. 68(4)
- Publication Year :
- 2020
-
Abstract
- African swine fever (ASF) is a highly infectious viral disease with high mortality. The most recent ASF outbreak in Vietnam began in 2019, posing a threat to spread to the neighbouring Asian countries. Without a commercial vaccine or efficient chemotherapeutics, rapid diagnosis and necessary biosecurity procedures are required to control the disease. While the diagnostic method of ASF recommended by the World Organization of Animal Health is real-time PCR, the ideal diagnosis procedure including master mix setup, template extraction and a high-cost qPCR equipment for many samples being tested simultaneously is not portable. In this study, a colorimetric loop-mediated isothermal amplification (LAMP) assay was modified and evaluated for ASF virus detection using crude serum samples collected from domestic pigs in Vietnam during the 2019 outbreak. The LAMP results can be readily visualized to the naked eye within 30 min without the requirement of DNA extraction and sophisticated equipment. The sensitivity, specificity and limit of detection of direct colorimetric LAMP assay were comparable to a commercial diagnostic real-time PCR kit. Results strongly indicate that the adapted colorimetric LAMP assay has a remarkable potential for the in-field diagnosis of ASF.
- Subjects :
- Validation study
Swine
Sus scrofa
Loop-mediated isothermal amplification
African swine fever virus
Rapid detection
Sensitivity and Specificity
Disease Outbreaks
Medicine
Animals
African Swine Fever
Swine Diseases
General Veterinary
General Immunology and Microbiology
biology
African swine fever
business.industry
Outbreak
General Medicine
biology.organism_classification
Virology
DNA extraction
African Swine Fever Virus
Virus detection
Molecular Diagnostic Techniques
Vietnam
Colorimetry
business
Nucleic Acid Amplification Techniques
Subjects
Details
- ISSN :
- 18651682
- Volume :
- 68
- Issue :
- 4
- Database :
- OpenAIRE
- Journal :
- Transboundary and emerging diseasesREFERENCES
- Accession number :
- edsair.doi.dedup.....8796cd4ed00f6bdfd324f6f98bacc224