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The Alkylation Mechanism of Zinc-Bound Thiolates Depends upon the Zinc Ligands
- Source :
- Inorganic Chemistry, Inorganic Chemistry, American Chemical Society, 2008, 47 (18), pp.8167-8178. ⟨10.1021/ic800697s⟩
- Publication Year :
- 2008
- Publisher :
- American Chemical Society (ACS), 2008.
-
Abstract
- International audience; Alkylation of zinc-bound thiolates occurs in both catalytic and structural zinc sites of enzymes. Recent biomimetic studies have led to a controversy as to which mechanism is operative in thiolate alkylation. Building on one of these biomimetic complexes, we have devised a series of models that allow for an appraisal of the roles of charge, ligand nature, and hydrogen bonding to sulfur on reactivity. The reactions of these complexes with methyl iodide, leading to thioethers and zinc iodide complexes, have been examined by density functional theory calculations, in the gas phase as well as in an aqueous solution. In all cases, a S(N)2 reaction is favored over sigma-bond metathesis. Both the net electronic charge and the hydrogen bond play a significant role in the nucleophilicity of the thiolate. We find that the mechanistic diversity observed experimentally can be explained by the difference in the net charge of the complexes. A dianionic complex follows a dissociative pathway, whereas an associative one is preferred for a neutral system.
- Subjects :
- STRUCTURAL-CHARACTERIZATION
Alkylation
HIV-1 NUCLEOCAPSID PROTEIN
AZAMACROCYCLIC LIGANDS
chemistry.chemical_element
Zinc
[CHIM.INOR]Chemical Sciences/Inorganic chemistry
Ligands
010402 general chemistry
Photochemistry
01 natural sciences
Inorganic Chemistry
chemistry.chemical_compound
Nucleophile
BONDING INTERACTIONS
DENSITY-FUNCTIONAL THEORY (DFT)
Polymer chemistry
[CHIM.COOR]Chemical Sciences/Coordination chemistry
Sulfhydryl Compounds
Physical and Theoretical Chemistry
COORDINATION CENTERS
SULFUR ALKYLATION
ESCHERICHIA-COLI ADA
010405 organic chemistry
Ligand
Hydrogen bond
Hydrogen Bonding
INDEPENDENT METHIONINE SYNTHASE
0104 chemical sciences
[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry
chemistry
Zinc iodide
Solvents
GERANYLGERANYLTRANSFERASE TYPE-I
Transition metal thiolate complex
Methyl iodide
Subjects
Details
- ISSN :
- 1520510X and 00201669
- Volume :
- 47
- Database :
- OpenAIRE
- Journal :
- Inorganic Chemistry
- Accession number :
- edsair.doi.dedup.....870ac0ff1e9b828dbbc4870f37e71b6b
- Full Text :
- https://doi.org/10.1021/ic800697s